EnhancerDB
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  3. vista5834[chr1:241781298-241781471]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5834[chr1:241781298-241781471]
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Tissue distribution of vista5834
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Transcription factor that possibly regulate vista5834[chr1:241781298-241781471]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 241781298 241781313 FOXP1 JASPAR yes 118495250
chr1 241781304 241781310 TBP TRANSFAC yes 118495251
chr1 241781305 241781317 FOXC2 JASPAR yes 118495252
chr1 241781307 241781321 ONECUT2 JASPAR yes 118495253
chr1 241781307 241781321 ONECUT3 JASPAR yes 118495254
chr1 241781307 241781322 FOXP1 JASPAR yes 118495255
chr1 241781308 241781323 FOXA1 JASPAR yes 118495256
chr1 241781309 241781320 FOXB1 JASPAR yes 118495257
chr1 241781309 241781320 FOXC1 JASPAR yes 118495258
chr1 241781309 241781321 FOXC2 JASPAR yes 118495259
chr1 241781310 241781322 FOXI1 JASPAR yes 118495260
chr1 241781311 241781325 ONECUT2 JASPAR yes 118495261
chr1 241781311 241781325 ONECUT3 JASPAR yes 118495262
chr1 241781311 241781326 FOXP1 JASPAR yes 118495263
chr1 241781311 241781326 HNF1A JASPAR yes 118495264
chr1 241781312 241781326 POU4F1 JASPAR yes 118495265
chr1 241781312 241781327 FOXA1 JASPAR yes 118495266
chr1 241781312 241781328 POU4F3 JASPAR yes 118495267
chr1 241781313 241781324 FOXB1 JASPAR yes 118495268
chr1 241781313 241781324 FOXC1 JASPAR yes 118495269
chr1 241781313 241781324 PROP1 JASPAR yes 118495270
chr1 241781313 241781325 FOXC2 JASPAR yes 118495271
chr1 241781314 241781326 FOXI1 JASPAR yes 118495272
chr1 241781317 241781332 FOXP1 JASPAR yes 118495273
chr1 241781317 241781332 MEF2C JASPAR yes 118495274
chr1 241781317 241781338 IRF1 JASPAR yes 118495275
chr1 241781318 241781333 MEF2A JASPAR yes 118495276
chr1 241781319 241781331 FOXC2 JASPAR yes 118495277
chr1 241781319 241781331 MEF2A JASPAR yes 118495278
chr1 241781319 241781331 MEF2B JASPAR yes 118495279
chr1 241781319 241781331 MEF2D JASPAR yes 118495280
chr1 241781320 241781330 MEF2A JASPAR yes 118495281
chr1 241781321 241781336 FOXP1 JASPAR yes 118495282
chr1 241781327 241781333 TBP TRANSFAC yes 118495283
chr1 241781333 241781354 ZNF263 JASPAR yes 118495284
chr1 241781338 241781346 TBX15 JASPAR yes 118495285
chr1 241781339 241781344 SP1 TRANSFAC yes 118495286
chr1 241781343 241781357 STAT1 JASPAR yes 118495287
chr1 241781343 241781358 STAT2 JASPAR yes 118495288
chr1 241781347 241781352 ETS2 TRANSFAC yes 118495289
chr1 241781370 241781374 YY1 TRANSFAC yes 118495290
chr1 241781375 241781381 MZF1 JASPAR yes 118495291
chr1 241781380 241781392 GLI2 JASPAR yes 118495292
chr1 241781380 241781395 RUNX2 JASPAR yes 118495293
chr1 241781381 241781390 RUNX2 JASPAR yes 118495294
chr1 241781381 241781391 RUNX3 JASPAR yes 118495295
chr1 241781386 241781392 SOX10 JASPAR yes 118495296
chr1 241781392 241781403 TBX20 JASPAR yes 118495297
chr1 241781392 241781403 TBX2 JASPAR yes 118495298
chr1 241781392 241781405 EOMES JASPAR yes 118495299
chr1 241781393 241781401 MGA JASPAR yes 118495300
chr1 241781393 241781401 TBX15 JASPAR yes 118495301
chr1 241781393 241781401 TBX1 JASPAR yes 118495302
chr1 241781393 241781401 TBX4 JASPAR yes 118495303
chr1 241781393 241781401 TBX5 JASPAR yes 118495304
chr1 241781393 241781403 TBR1 JASPAR yes 118495305
chr1 241781427 241781437 TEAD1 JASPAR yes 118495306
chr1 241781427 241781437 TEAD4 JASPAR yes 118495307
chr1 241781433 241781448 MEF2A JASPAR yes 118495308
chr1 241781434 241781449 MEF2C JASPAR yes 118495309
chr1 241781437 241781441 YY1 TRANSFAC yes 118495310
chr1 241781440 241781454 PAX6 JASPAR yes 118495311
chr1 241781459 241781463 NFE TRANSFAC yes 118495312
chr1 241781459 241781466 MEIS1 JASPAR yes 118495313
SNP sites on vista5834[chr1:241781298-241781471]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 241781313 rs34195772 AT A
FOXA1 FOXB1 FOXC1 FOXC2 FOXI1 FOXP1 HNF1A ONECUT2 ONECUT3 POU4F1 POU4F3 PROP1
1077966
chr1 241781397 rs370275189 TGTTA T
EOMES MGA TBR1 TBX1 TBX15 TBX2 TBX20 TBX4 TBX5
1077967
chr1 241781397 rs78048196 TGTTA T
EOMES MGA TBR1 TBX1 TBX15 TBX2 TBX20 TBX4 TBX5
1077968
Genes possibly regulated by vista5834[chr1:241781298-241781471]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 241660903 241683061 - FH ENSG00000091483.6 241683061 0.74 0.98 1990 1763
chr1 241695434 241758944 + KMO ENSG00000117009.7 241695434 0.9 1.0 1991 14136
chr1 241753404 241840678 - OPN3 ENSG00000054277.8 241840678 0.88 0.97 1992 40793
chr1 241792155 241799232 - CHML ENSG00000203668.1 241799232 0.76 0.9 1993 82239
chr1 241815580 241965435 + WDR64 ENSG00000162843.13 241815580 0.86 1.0 1994 65891
Expression level of Genes
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miRNAs possibly regulated by vista5834[chr1:241781298-241781471]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results