EnhancerDB
  1. Home
  2. Enhancers
  3. vista5835[chr1:241790752-241791037]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5835[chr1:241790752-241791037]
Back to top
Tissue distribution of vista5835
Back to top
Transcription factor that possibly regulate vista5835[chr1:241790752-241791037]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 241790733 241791177 CTCF UCSC Txn Factor no Conserved 107887618
chr1 241790829 241791126 SMC3 UCSC Txn Factor no Conserved 107887627
chr1 241790831 241791115 RAD21 UCSC Txn Factor no Conserved 107887629
chr1 241790761 241790769 GATA3 JASPAR yes 36619517
chr1 241790761 241790769 GATA3 JASPAR yes 118495314
chr1 241790769 241790775 SOX10 JASPAR yes 36619518
chr1 241790769 241790775 SOX10 JASPAR yes 118495315
chr1 241790782 241790786 TEAD2 TRANSFAC yes 36619519
chr1 241790782 241790786 TEAD2 TRANSFAC yes 118495316
chr1 241790782 241790787 TBP TRANSFAC yes 36619520
chr1 241790782 241790787 TBP TRANSFAC yes 118495317
chr1 241790782 241790788 TMF TRANSFAC yes 36619521
chr1 241790782 241790788 TMF TRANSFAC yes 118495318
chr1 241790811 241790816 MYC TRANSFAC yes 36619522
chr1 241790811 241790816 MYC TRANSFAC yes 118495319
chr1 241790865 241790875 NKX2-3 JASPAR yes 36619523
chr1 241790865 241790875 NKX2-3 JASPAR yes 118495320
chr1 241790892 241790907 MEF2C JASPAR yes 36619524
chr1 241790892 241790907 MEF2C JASPAR yes 118495321
chr1 241790895 241790899 YY1 TRANSFAC yes 36619525
chr1 241790895 241790899 YY1 TRANSFAC yes 118495322
chr1 241790898 241790904 TCF4 TRANSFAC yes 36619526
chr1 241790898 241790904 TCF4 TRANSFAC yes 118495323
chr1 241790920 241790929 ZEB1 JASPAR yes 36619527
chr1 241790920 241790929 ZEB1 JASPAR yes 118495324
chr1 241790922 241790933 FOS JASPAR yes 36619528
chr1 241790922 241790933 JUND JASPAR yes 36619529
chr1 241790922 241790933 FOS JASPAR yes 118495325
chr1 241790922 241790933 JUND JASPAR yes 118495326
chr1 241790923 241790934 FOSL2 JASPAR yes 36619530
chr1 241790923 241790934 JUNB JASPAR yes 36619531
chr1 241790923 241790934 FOSL2 JASPAR yes 118495327
chr1 241790923 241790934 JUNB JASPAR yes 118495328
chr1 241790924 241790930 JUN TRANSFAC yes 36619532
chr1 241790924 241790930 JUN TRANSFAC yes 118495329
chr1 241790962 241790974 EHF JASPAR yes 36619533
chr1 241790962 241790974 EHF JASPAR yes 118495330
chr1 241790974 241790993 CTCF JASPAR yes 36619534
chr1 241790974 241790993 CTCF JASPAR yes 118495331
chr1 241790977 241790991 ZIC1 JASPAR yes 36619535
chr1 241790977 241790991 ZIC1 JASPAR yes 118495332
chr1 241790977 241790992 ZIC3 JASPAR yes 36619536
chr1 241790977 241790992 ZIC4 JASPAR yes 36619537
chr1 241790977 241790992 ZIC3 JASPAR yes 118495333
chr1 241790977 241790992 ZIC4 JASPAR yes 118495334
chr1 241791003 241791007 YY1 TRANSFAC yes 36619538
chr1 241791003 241791007 YY1 TRANSFAC yes 118495335
chr1 241791019 241791030 ETV2 JASPAR yes 36619539
chr1 241791019 241791030 ETV2 JASPAR yes 118495336
chr1 241791020 241791031 FLI1 JASPAR yes 36619540
chr1 241791020 241791031 FLI1 JASPAR yes 118495337
chr1 241791021 241791026 ETS2 TRANSFAC yes 36619541
chr1 241791021 241791026 ETS2 TRANSFAC yes 118495338
chr1 241791021 241791029 FEV JASPAR yes 36619542
chr1 241791021 241791029 FEV JASPAR yes 118495339
chr1 241791037 241791049 FOXI1 JASPAR yes 36619543
chr1 241791037 241791049 FOXI1 JASPAR yes 118495340
SNP sites on vista5835[chr1:241790752-241791037]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 241790887 rs77832501 G A
CTCF RAD21 SMC3
1078034
chr1 241790895 rs574204177 A C,G
CTCF MEF2C RAD21 SMC3 YY1
1078035
Genes possibly regulated by vista5835[chr1:241790752-241791037]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 241695434 241758944 + KMO ENSG00000117009.7 241695434 0.9 1.0 1991 4682
chr1 241753404 241840678 - OPN3 ENSG00000054277.8 241840678 0.88 0.97 1992 50359
chr1 241792155 241799232 - CHML ENSG00000203668.1 241799232 0.76 0.9 1993 91805
chr1 241815580 241965435 + WDR64 ENSG00000162843.13 241815580 0.86 1.0 1994 75457
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5835[chr1:241790752-241791037]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results