EnhancerDB
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  3. vista5836[chr1:241804319-241804678]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5836[chr1:241804319-241804678]
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Tissue distribution of vista5836
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Transcription factor that possibly regulate vista5836[chr1:241804319-241804678]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 241803795 241804393 TFAP2C UCSC Txn Factor no Conserved 107887644
chr1 241803832 241804409 TFAP2A UCSC Txn Factor no Conserved 107887645
chr1 241804453 241804854 CEBPB UCSC Txn Factor no Conserved 107887654
chr1 241804510 241804803 NR3C1 UCSC Txn Factor no Conserved 107887666
chr1 241804510 241804851 RFX5 UCSC Txn Factor no Conserved 107887668
chr1 241804513 241804789 TCF7L2 UCSC Txn Factor no Conserved 107887669
chr1 241804525 241804805 CREB1 UCSC Txn Factor no Conserved 107887675
chr1 241804326 241804336 TEAD4 JASPAR yes 118495341
chr1 241804326 241804338 TEAD1 JASPAR yes 118495342
chr1 241804327 241804335 TEAD3 JASPAR yes 118495343
chr1 241804332 241804336 H1TF2 TRANSFAC yes 118495344
chr1 241804332 241804336 NFE TRANSFAC yes 118495345
chr1 241804332 241804336 SRF TRANSFAC yes 118495346
chr1 241804351 241804360 TFAP2A JASPAR yes 118495347
chr1 241804376 241804380 H1TF2 TRANSFAC yes 118495348
chr1 241804376 241804380 NFE TRANSFAC yes 118495349
chr1 241804376 241804380 SRF TRANSFAC yes 118495350
chr1 241804384 241804395 FLI1 JASPAR yes 118495351
chr1 241804384 241804399 AR JASPAR yes 118495352
chr1 241804386 241804394 EHF JASPAR yes 118495353
chr1 241804414 241804424 ERF JASPAR yes 118495354
chr1 241804414 241804424 ERG JASPAR yes 118495355
chr1 241804414 241804424 ETS1 JASPAR yes 118495356
chr1 241804414 241804424 ETV1 JASPAR yes 118495357
chr1 241804414 241804424 ETV4 JASPAR yes 118495358
chr1 241804414 241804424 FEV JASPAR yes 118495359
chr1 241804414 241804424 FLI1 JASPAR yes 118495360
chr1 241804414 241804425 ETV2 JASPAR yes 118495361
chr1 241804416 241804422 ETS1 JASPAR yes 118495362
chr1 241804416 241804426 ELK1 JASPAR yes 118495363
chr1 241804418 241804436 ESR1 JASPAR yes 118495364
chr1 241804420 241804435 ESR2 JASPAR yes 118495365
chr1 241804421 241804425 ESR1 TRANSFAC yes 118495366
chr1 241804450 241804465 PRDM1 JASPAR yes 118495367
chr1 241804453 241804471 RARA JASPAR yes 118495368
chr1 241804490 241804499 SNAI2 JASPAR yes 118495369
chr1 241804490 241804500 ID4 JASPAR yes 118495370
chr1 241804490 241804500 NHLH1 JASPAR yes 118495371
chr1 241804490 241804500 TCF3 JASPAR yes 118495372
chr1 241804490 241804500 TCF4 JASPAR yes 118495373
chr1 241804495 241804510 MEF2A JASPAR yes 118495374
chr1 241804496 241804511 MEF2A JASPAR yes 118495375
chr1 241804496 241804511 MEF2C JASPAR yes 118495376
chr1 241804497 241804509 MEF2A JASPAR yes 118495377
chr1 241804497 241804509 MEF2B JASPAR yes 118495378
chr1 241804497 241804509 MEF2D JASPAR yes 118495379
chr1 241804498 241804508 MEF2A JASPAR yes 118495380
chr1 241804501 241804505 YY1 TRANSFAC yes 118495381
chr1 241804517 241804521 YY1 TRANSFAC yes 118495382
chr1 241804521 241804535 PLAG1 JASPAR yes 118495383
chr1 241804564 241804579 MEF2A JASPAR yes 118495384
chr1 241804582 241804594 CREB1 JASPAR yes 118495385
chr1 241804583 241804588 ATF1 TRANSFAC yes 118495386
chr1 241804600 241804610 MSC JASPAR yes 118495387
chr1 241804612 241804627 RUNX2 JASPAR yes 118495388
chr1 241804615 241804621 SOX10 JASPAR yes 118495389
chr1 241804615 241804626 RUNX1 JASPAR yes 118495390
chr1 241804616 241804626 RUNX3 JASPAR yes 118495391
chr1 241804616 241804628 ZBTB7A JASPAR yes 118495392
chr1 241804617 241804626 RUNX2 JASPAR yes 118495393
chr1 241804621 241804632 CEBPB JASPAR yes 118495394
chr1 241804621 241804633 HLF JASPAR yes 118495395
chr1 241804622 241804632 CEBPB JASPAR yes 118495396
chr1 241804622 241804632 CEBPD JASPAR yes 118495397
chr1 241804622 241804632 CEBPE JASPAR yes 118495398
chr1 241804622 241804632 CEBPG JASPAR yes 118495399
chr1 241804622 241804633 CEBPA JASPAR yes 118495400
chr1 241804652 241804660 NR4A2 JASPAR yes 118495401
chr1 241804661 241804676 RFX5 JASPAR yes 118495402
chr1 241804662 241804668 MZF1 JASPAR yes 118495403
chr1 241804669 241804677 TBX5 JASPAR yes 118495404
chr1 241804669 241804678 ZEB1 JASPAR yes 118495405
chr1 241804672 241804677 USF2 TRANSFAC yes 118495406
SNP sites on vista5836[chr1:241804319-241804678]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 241804342 rs556379610 C A
TFAP2A TFAP2C
1078153
chr1 241804573 rs77469747 A G
CEBPB CREB1 MEF2A NR3C1 RFX5 TCF7L2
1078154
chr1 241804591 rs76028420 C T
CEBPB CREB1 NR3C1 RFX5 TCF7L2
1078155
Genes possibly regulated by vista5836[chr1:241804319-241804678]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 241753404 241840678 - OPN3 ENSG00000054277.8 241840678 0.88 0.97 1992 64000
chr1 241792155 241799232 - CHML ENSG00000203668.1 241799232 0.76 0.9 1993 94913
chr1 241815580 241965435 + WDR64 ENSG00000162843.13 241815580 0.86 1.0 1994 89098
Expression level of Genes
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miRNAs possibly regulated by vista5836[chr1:241804319-241804678]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results