EnhancerDB
  1. Home
  2. Enhancers
  3. vista5841[chr1:242609605-242610011]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5841[chr1:242609605-242610011]
Back to top
Tissue distribution of vista5841
Back to top
Transcription factor that possibly regulate vista5841[chr1:242609605-242610011]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 242609614 242609635 LUN1 TRANSFAC yes 118495489
chr1 242609655 242609673 RARA JASPAR yes 118495490
chr1 242609665 242609685 ESR1 JASPAR yes 118495491
chr1 242609670 242609685 ESR2 JASPAR yes 118495492
chr1 242609673 242609677 H1TF2 TRANSFAC yes 118495493
chr1 242609673 242609677 NFE TRANSFAC yes 118495494
chr1 242609673 242609677 SRF TRANSFAC yes 118495495
chr1 242609698 242609702 NFE TRANSFAC yes 118495496
chr1 242609721 242609733 NHLH1 JASPAR yes 118495497
chr1 242609722 242609732 TFAP4 JASPAR yes 118495498
chr1 242609805 242609822 ESR1 JASPAR yes 118495499
chr1 242609814 242609824 SREBF1 JASPAR yes 118495500
chr1 242609835 242609844 NKX2-8 JASPAR yes 118495501
chr1 242609849 242609859 SREBF1 JASPAR yes 118495502
chr1 242609856 242609869 ATF4 JASPAR yes 118495503
chr1 242609874 242609878 NFE TRANSFAC yes 118495504
chr1 242609874 242609879 GATA1 TRANSFAC yes 118495505
chr1 242609874 242609880 GATA3 JASPAR yes 118495506
chr1 242609877 242609891 IRF7 JASPAR yes 118495507
chr1 242609878 242609888 MEF2A JASPAR yes 118495508
chr1 242609880 242609895 FOXP1 JASPAR yes 118495509
chr1 242609881 242609902 IRF1 JASPAR yes 118495510
chr1 242609882 242609897 LEF1 JASPAR yes 118495511
chr1 242609885 242609900 PRDM1 JASPAR yes 118495512
chr1 242609885 242609900 STAT2 JASPAR yes 118495513
chr1 242609898 242609901 MYB TRANSFAC yes 118495514
chr1 242609905 242609909 NFE TRANSFAC yes 118495515
chr1 242609922 242609927 GATA2 JASPAR yes 118495516
chr1 242609949 242609963 PLAG1 JASPAR yes 118495517
chr1 242609958 242609971 ZBTB18 JASPAR yes 118495518
chr1 242609959 242609971 NHLH1 JASPAR yes 118495519
chr1 242609959 242609972 ZBTB18 JASPAR yes 118495520
chr1 242609960 242609970 FIGLA JASPAR yes 118495521
chr1 242609960 242609970 MSC JASPAR yes 118495522
chr1 242609960 242609970 MYF6 JASPAR yes 118495523
chr1 242609960 242609970 NHLH1 JASPAR yes 118495524
chr1 242609960 242609970 TFAP4 JASPAR yes 118495525
chr1 242609960 242609972 TAL1 JASPAR yes 118495526
chr1 242609968 242609979 STAT1 JASPAR yes 118495527
chr1 242609981 242609985 ESR1 TRANSFAC yes 118495528
chr1 242609990 242610005 AR JASPAR yes 118495529
chr1 242609992 242610004 BHLHE23 JASPAR yes 118495530
chr1 242609993 242610003 OLIG1 JASPAR yes 118495531
SNP sites on vista5841[chr1:242609605-242610011]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 242609653 rs572965670 C T no 1081226
chr1 242609725 rs138442378 C T
NHLH1 TFAP4
1081227
chr1 242609863 rs3856235 C T
ATF4
1081228
chr1 242609894 rs148620012 A C
FOXP1 IRF1 LEF1 PRDM1 STAT2
1081229
chr1 242609942 rs142048119 G A no 1081230
chr1 242609972 rs551222648 A G
STAT1 TAL1 ZBTB18
1081231
chr1 242609986 rs571000676 A G no 1081232
Genes possibly regulated by vista5841[chr1:242609605-242610011]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 242246288 242687998 - PLD5 ENSG00000180287.12 242687998 0.95 0.99 1997 22013
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5841[chr1:242609605-242610011]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results