EnhancerDB
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  3. vista5842[chr1:242611588-242611883]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5842[chr1:242611588-242611883]
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Tissue distribution of vista5842
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Transcription factor that possibly regulate vista5842[chr1:242611588-242611883]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 242611598 242611615 BCL6B JASPAR yes 118495532
chr1 242611599 242611614 STAT1 JASPAR yes 118495533
chr1 242611602 242611613 STAT3 JASPAR yes 118495534
chr1 242611607 242611621 STAT1 JASPAR yes 118495535
chr1 242611632 242611653 ZNF263 JASPAR yes 118495536
chr1 242611671 242611679 RHOXF1 JASPAR yes 118495537
chr1 242611672 242611687 FOXP1 JASPAR yes 118495538
chr1 242611675 242611686 FOXP2 JASPAR yes 118495539
chr1 242611676 242611680 TEAD2 TRANSFAC yes 118495540
chr1 242611676 242611681 TBP TRANSFAC yes 118495541
chr1 242611683 242611701 NR3C1 JASPAR yes 118495542
chr1 242611691 242611695 YY1 TRANSFAC yes 118495543
chr1 242611702 242611714 NHLH1 JASPAR yes 118495544
chr1 242611703 242611713 NHLH1 JASPAR yes 118495545
chr1 242611703 242611713 TFAP4 JASPAR yes 118495546
chr1 242611721 242611728 NKX3-1 JASPAR yes 118495547
chr1 242611727 242611731 YY1 TRANSFAC yes 118495548
chr1 242611759 242611767 GATA3 JASPAR yes 118495549
chr1 242611778 242611789 NFIL3 JASPAR yes 118495550
chr1 242611789 242611793 YY1 TRANSFAC yes 118495551
chr1 242611789 242611800 HOXA10 JASPAR yes 118495552
chr1 242611802 242611817 HNF4G JASPAR yes 118495553
chr1 242611806 242611812 SOX10 JASPAR yes 118495554
chr1 242611813 242611817 YY1 TRANSFAC yes 118495555
chr1 242611814 242611823 PITX3 JASPAR yes 118495556
chr1 242611814 242611824 GSC2 JASPAR yes 118495557
chr1 242611814 242611824 GSC JASPAR yes 118495558
chr1 242611815 242611823 OTX1 JASPAR yes 118495559
chr1 242611815 242611823 OTX2 JASPAR yes 118495560
chr1 242611845 242611854 SOX9 JASPAR yes 118495561
chr1 242611863 242611877 E2F7 JASPAR yes 118495562
SNP sites on vista5842[chr1:242611588-242611883]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 242611596 rs562762465 T A no 1081252
chr1 242611606 rs2810038 C T
BCL6B STAT1 STAT3
1081253
chr1 242611811 rs145606553 G A,T
HNF4G SOX10
1081254
chr1 242611817 rs148895746 T C
GSC GSC2 HNF4G OTX1 OTX2 PITX3 YY1
1081255
chr1 242611858 rs143246944 G C no 1081256
Genes possibly regulated by vista5842[chr1:242611588-242611883]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 242246288 242687998 - PLD5 ENSG00000180287.12 242687998 0.95 0.99 1997 23885
Expression level of Genes
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miRNAs possibly regulated by vista5842[chr1:242611588-242611883]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results