EnhancerDB
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  3. vista5845[chr1:242693822-242693939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5845[chr1:242693822-242693939]
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Tissue distribution of vista5845
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Transcription factor that possibly regulate vista5845[chr1:242693822-242693939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 242693829 242693838 HIC2 JASPAR yes 118495611
chr1 242693829 242693839 NFIA JASPAR yes 118495612
chr1 242693830 242693839 NFIX JASPAR yes 118495613
chr1 242693831 242693837 NFIC JASPAR yes 118495614
chr1 242693839 242693860 REST JASPAR yes 118495615
chr1 242693840 242693844 YY1 TRANSFAC yes 118495616
chr1 242693843 242693858 HNF4A JASPAR yes 118495617
chr1 242693844 242693859 HNF4G JASPAR yes 118495618
chr1 242693848 242693854 SOX10 JASPAR yes 118495619
chr1 242693876 242693885 NKX2-8 JASPAR yes 118495620
chr1 242693888 242693904 ZNF143 JASPAR yes 118495621
chr1 242693898 242693919 IRF1 JASPAR yes 118495622
chr1 242693900 242693910 TEAD1 JASPAR yes 118495623
chr1 242693900 242693910 TEAD4 JASPAR yes 118495624
chr1 242693909 242693915 LEF1 TRANSFAC yes 118495625
chr1 242693909 242693915 TCF4 TRANSFAC yes 118495626
chr1 242693919 242693929 SREBF1 JASPAR yes 118495627
chr1 242693919 242693929 SREBF2 JASPAR yes 118495628
chr1 242693924 242693932 NR4A2 JASPAR yes 118495629
SNP sites on vista5845[chr1:242693822-242693939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista5845[chr1:242693822-242693939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 242246288 242687998 - PLD5 ENSG00000180287.12 242687998 0.95 0.99 1997 94176
Expression level of Genes
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miRNAs possibly regulated by vista5845[chr1:242693822-242693939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 243509527 243509548 + hsa-miR-4677-3p MIMAT0019761 243419357 0.11900808472339726 0.834486 0.0 138
Expression level of miRNAs
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