EnhancerDB
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  3. vista5847[chr1:243428005-243428394]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5847[chr1:243428005-243428394]
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Tissue distribution of vista5847
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Transcription factor that possibly regulate vista5847[chr1:243428005-243428394]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 243428047 243428303 CEBPB UCSC Txn Factor no Conserved 107887717
chr1 243428123 243428427 GATA2 UCSC Txn Factor no Conserved 107887720
chr1 243428202 243428327 TEAD4 UCSC Txn Factor no Conserved 107887724
chr1 243428003 243428015 PBX1 JASPAR yes 36664059
chr1 243428003 243428015 PBX1 JASPAR yes 118495645
chr1 243428009 243428021 FOXI1 JASPAR yes 36664060
chr1 243428009 243428021 FOXI1 JASPAR yes 118495646
chr1 243428017 243428022 GATA2 JASPAR yes 36664061
chr1 243428017 243428022 GATA2 JASPAR yes 118495647
chr1 243428025 243428029 YY1 TRANSFAC yes 36664062
chr1 243428025 243428029 YY1 TRANSFAC yes 118495648
chr1 243428058 243428069 USF1 JASPAR yes 36664063
chr1 243428058 243428069 USF2 JASPAR yes 36664064
chr1 243428058 243428069 USF1 JASPAR yes 118495649
chr1 243428058 243428069 USF2 JASPAR yes 118495650
chr1 243428082 243428086 H4TF2 TRANSFAC yes 36664065
chr1 243428082 243428086 H4TF2 TRANSFAC yes 118495651
chr1 243428084 243428096 FOXI1 JASPAR yes 36664066
chr1 243428084 243428096 FOXI1 JASPAR yes 118495652
chr1 243428097 243428113 RFX4 JASPAR yes 36664067
chr1 243428097 243428113 RFX4 JASPAR yes 118495653
chr1 243428103 243428113 HMBOX1 JASPAR yes 36664068
chr1 243428103 243428113 HMBOX1 JASPAR yes 118495654
chr1 243428121 243428133 EHF JASPAR yes 36664069
chr1 243428121 243428133 ELF4 JASPAR yes 36664070
chr1 243428121 243428133 EHF JASPAR yes 118495655
chr1 243428121 243428133 ELF4 JASPAR yes 118495656
chr1 243428130 243428145 RFX5 JASPAR yes 36664071
chr1 243428130 243428145 RFX5 JASPAR yes 118495657
chr1 243428138 243428143 TFAP2A TRANSFAC yes 36664072
chr1 243428138 243428143 TFAP2A TRANSFAC yes 118495658
chr1 243428138 243428144 MZF1 JASPAR yes 36664073
chr1 243428138 243428144 MZF1 JASPAR yes 118495659
chr1 243428140 243428154 STAT1 JASPAR yes 36664074
chr1 243428140 243428154 STAT1 JASPAR yes 118495660
chr1 243428163 243428174 CEBPA JASPAR yes 36664075
chr1 243428163 243428174 CEBPA JASPAR yes 118495661
chr1 243428164 243428174 CEBPB JASPAR yes 36664076
chr1 243428164 243428174 CEBPD JASPAR yes 36664077
chr1 243428164 243428174 CEBPE JASPAR yes 36664078
chr1 243428164 243428174 CEBPB JASPAR yes 118495662
chr1 243428164 243428174 CEBPD JASPAR yes 118495663
chr1 243428164 243428174 CEBPE JASPAR yes 118495664
chr1 243428164 243428175 CEBPB JASPAR yes 36664079
chr1 243428164 243428175 CEBPB JASPAR yes 118495665
chr1 243428181 243428185 NFE TRANSFAC yes 36664080
chr1 243428181 243428185 NFE TRANSFAC yes 118495666
chr1 243428187 243428198 EBF1 JASPAR yes 36664081
chr1 243428187 243428198 EBF1 JASPAR yes 118495667
chr1 243428196 243428209 ELF1 JASPAR yes 36664082
chr1 243428196 243428209 ELF1 JASPAR yes 118495668
chr1 243428198 243428209 ETV2 JASPAR yes 36664083
chr1 243428198 243428209 ETV2 JASPAR yes 118495669
chr1 243428199 243428206 SPIB JASPAR yes 36664084
chr1 243428199 243428206 SPIB JASPAR yes 118495670
chr1 243428199 243428209 ETV6 JASPAR yes 36664085
chr1 243428199 243428209 ETV6 JASPAR yes 118495671
chr1 243428199 243428210 FLI1 JASPAR yes 36664086
chr1 243428199 243428210 FLI1 JASPAR yes 118495672
chr1 243428200 243428208 FEV JASPAR yes 36664087
chr1 243428200 243428208 FEV JASPAR yes 118495673
chr1 243428234 243428248 GATA2 JASPAR yes 36664088
chr1 243428234 243428248 GATA2 JASPAR yes 118495674
chr1 243428236 243428244 GATA3 JASPAR yes 36664089
chr1 243428236 243428244 GATA3 JASPAR yes 118495675
chr1 243428252 243428256 YY1 TRANSFAC yes 36664090
chr1 243428252 243428256 YY1 TRANSFAC yes 118495676
chr1 243428258 243428263 MYC TRANSFAC yes 36664091
chr1 243428258 243428263 MYC TRANSFAC yes 118495677
chr1 243428263 243428268 GATA2 JASPAR yes 36664092
chr1 243428263 243428268 GATA2 JASPAR yes 118495678
chr1 243428268 243428282 STAT1 JASPAR yes 36664093
chr1 243428268 243428282 STAT1 JASPAR yes 118495679
chr1 243428268 243428283 STAT2 JASPAR yes 36664094
chr1 243428268 243428283 STAT2 JASPAR yes 118495680
chr1 243428276 243428279 MYB TRANSFAC yes 36664095
chr1 243428276 243428279 MYB TRANSFAC yes 118495681
chr1 243428276 243428291 HSF1 JASPAR yes 36664096
chr1 243428276 243428291 HSF1 JASPAR yes 118495682
chr1 243428277 243428290 HSF1 JASPAR yes 36664097
chr1 243428277 243428290 HSF4 JASPAR yes 36664098
chr1 243428277 243428290 HSF1 JASPAR yes 118495683
chr1 243428277 243428290 HSF4 JASPAR yes 118495684
chr1 243428289 243428293 NFE TRANSFAC yes 36664099
chr1 243428289 243428293 NFE TRANSFAC yes 118495685
chr1 243428295 243428305 TFCP2 JASPAR yes 36664100
chr1 243428295 243428305 TFCP2 JASPAR yes 118495686
chr1 243428303 243428308 ETS2 TRANSFAC yes 36664101
chr1 243428303 243428308 ETS2 TRANSFAC yes 118495687
chr1 243428320 243428330 GATA1 TRANSFAC yes 36664102
chr1 243428320 243428330 GATA1 TRANSFAC yes 118495688
chr1 243428325 243428328 MYB TRANSFAC yes 36664103
chr1 243428325 243428328 MYB TRANSFAC yes 118495689
chr1 243428325 243428336 DUX4 JASPAR yes 36664104
chr1 243428325 243428336 DUX4 JASPAR yes 118495690
chr1 243428335 243428340 TFAP2A TRANSFAC yes 36664105
chr1 243428335 243428340 TFAP2A TRANSFAC yes 118495691
chr1 243428335 243428341 MZF1 JASPAR yes 36664106
chr1 243428335 243428341 MZF1 JASPAR yes 118495692
chr1 243428356 243428364 OTX2 JASPAR yes 36664107
chr1 243428356 243428364 OTX2 JASPAR yes 118495693
chr1 243428372 243428377 MYC TRANSFAC yes 36664108
chr1 243428372 243428377 MYC TRANSFAC yes 118495694
chr1 243428387 243428392 MYC TRANSFAC yes 36664109
chr1 243428387 243428392 MYC TRANSFAC yes 118495695
SNP sites on vista5847[chr1:243428005-243428394]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 243428038 rs181996861 T C no 1083040
chr1 243428152 rs12741781 T G
CEBPB GATA2 STAT1
1083041
chr1 243428175 rs138264026 AC A
CEBPB GATA2
1083042
chr1 243428175 rs952510385 AC A
CEBPB GATA2
1083043
chr1 243428250 rs369039574 TC T
CEBPB GATA2 TEAD4
1083044
chr1 243428367 rs143238608 G A
GATA2
1083045
Genes possibly regulated by vista5847[chr1:243428005-243428394]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 243287730 243418650 - CEP170 ENSG00000143702.11 243418650 0.74 0.98 1998 90645
chr1 243388058 243395911 + AC092782.1 ENSG00000269795.1 243388058 0.0 0.0 1999 60053
chr1 243419320 243663394 + SDCCAG8 ENSG00000054282.11 243419320 0.72 1.0 2000 91315
Expression level of Genes
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miRNAs possibly regulated by vista5847[chr1:243428005-243428394]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 243509527 243509548 + hsa-miR-4677-3p MIMAT0019761 243419357 0.0028756695799266986 0.834486 0.0 138
Expression level of miRNAs
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