EnhancerDB
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  3. vista5868[chr1:243923195-243923609]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5868[chr1:243923195-243923609]
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Tissue distribution of vista5868
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Transcription factor that possibly regulate vista5868[chr1:243923195-243923609]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 243923201 243923207 GATA1 TRANSFAC yes 118496708
chr1 243923218 243923222 YY1 TRANSFAC yes 118496709
chr1 243923243 243923254 HOXC11 JASPAR yes 118496710
chr1 243923258 243923263 TFAP2A TRANSFAC yes 118496711
chr1 243923258 243923264 MZF1 JASPAR yes 118496712
chr1 243923310 243923321 USF2 JASPAR yes 118496713
chr1 243923311 243923318 USF2 TRANSFAC yes 118496714
chr1 243923311 243923321 SREBF2 JASPAR yes 118496715
chr1 243923313 243923318 USF2 TRANSFAC yes 118496716
chr1 243923372 243923376 NFE TRANSFAC yes 118496717
chr1 243923373 243923378 GATA2 JASPAR yes 118496718
chr1 243923406 243923409 MYB TRANSFAC yes 118496719
chr1 243923424 243923428 YY1 TRANSFAC yes 118496720
chr1 243923447 243923466 PAX5 JASPAR yes 118496721
chr1 243923455 243923459 NFE TRANSFAC yes 118496722
chr1 243923482 243923497 HNF4A JASPAR yes 118496723
chr1 243923483 243923497 NR2F1 JASPAR yes 118496724
chr1 243923483 243923498 HNF4G JASPAR yes 118496725
chr1 243923483 243923498 NR2C2 JASPAR yes 118496726
chr1 243923527 243923535 GATA1 TRANSFAC yes 118496727
chr1 243923530 243923534 NFE TRANSFAC yes 118496728
chr1 243923530 243923535 GATA1 TRANSFAC yes 118496729
chr1 243923530 243923536 GATA3 JASPAR yes 118496730
chr1 243923578 243923599 IRF1 JASPAR yes 118496731
chr1 243923580 243923595 STAT2 JASPAR yes 118496732
chr1 243923580 243923601 IRF1 JASPAR yes 118496733
chr1 243923581 243923602 IRF1 JASPAR yes 118496734
chr1 243923582 243923603 IRF1 JASPAR yes 118496735
chr1 243923583 243923598 FOXP1 JASPAR yes 118496736
chr1 243923583 243923604 IRF1 JASPAR yes 118496737
chr1 243923584 243923599 FOXP1 JASPAR yes 118496738
chr1 243923584 243923605 IRF1 JASPAR yes 118496739
chr1 243923585 243923600 FOXP1 JASPAR yes 118496740
chr1 243923585 243923606 IRF1 JASPAR yes 118496741
chr1 243923586 243923601 FOXP1 JASPAR yes 118496742
chr1 243923586 243923607 IRF1 JASPAR yes 118496743
chr1 243923587 243923602 FOXP1 JASPAR yes 118496744
chr1 243923587 243923608 IRF1 JASPAR yes 118496745
chr1 243923588 243923603 FOXP1 JASPAR yes 118496746
chr1 243923589 243923604 FOXP1 JASPAR yes 118496747
chr1 243923590 243923605 FOXP1 JASPAR yes 118496748
chr1 243923591 243923606 FOXP1 JASPAR yes 118496749
chr1 243923592 243923607 FOXP1 JASPAR yes 118496750
chr1 243923593 243923608 FOXP1 JASPAR yes 118496751
SNP sites on vista5868[chr1:243923195-243923609]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 243923204 rs114363325 A G
GATA1
1084975
chr1 243923229 rs10803158 A G no 1084976
chr1 243923244 rs10927067 G A
HOXC11
1084977
chr1 243923247 rs138607402 C T
HOXC11
1084978
chr1 243923452 rs10927068 C T
PAX5
1084979
chr1 243923500 rs186731351 C T no 1084980
chr1 243923540 rs142697927 C T no 1084981
chr1 243923579 rs559399053 T C
IRF1
1084982
Genes possibly regulated by vista5868[chr1:243923195-243923609]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 243651535 244014381 - AKT3 ENSG00000117020.12 244014381 0.76 0.99 2001 9228
Expression level of Genes
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miRNAs possibly regulated by vista5868[chr1:243923195-243923609]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results