EnhancerDB
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  3. vista5870[chr1:243997018-243997244]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5870[chr1:243997018-243997244]
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Tissue distribution of vista5870
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Transcription factor that possibly regulate vista5870[chr1:243997018-243997244]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 243997023 243997038 MEF2C JASPAR yes 118496771
chr1 243997024 243997035 PHOX2A JASPAR yes 118496772
chr1 243997024 243997035 PROP1 JASPAR yes 118496773
chr1 243997052 243997058 TBP TRANSFAC yes 118496774
chr1 243997063 243997077 IRF7 JASPAR yes 118496775
chr1 243997090 243997103 SMAD2 JASPAR yes 118496776
chr1 243997093 243997103 TBR1 JASPAR yes 118496777
chr1 243997094 243997104 TBX21 JASPAR yes 118496778
chr1 243997095 243997103 MGA JASPAR yes 118496779
chr1 243997095 243997103 TBX15 JASPAR yes 118496780
chr1 243997095 243997103 TBX1 JASPAR yes 118496781
chr1 243997095 243997103 TBX4 JASPAR yes 118496782
chr1 243997095 243997103 TBX5 JASPAR yes 118496783
chr1 243997095 243997104 ZEB1 JASPAR yes 118496784
chr1 243997096 243997106 ID4 JASPAR yes 118496785
chr1 243997096 243997106 TCF3 JASPAR yes 118496786
chr1 243997096 243997106 TCF4 JASPAR yes 118496787
chr1 243997097 243997106 SNAI2 JASPAR yes 118496788
chr1 243997098 243997103 USF2 TRANSFAC yes 118496789
chr1 243997116 243997128 E2F8 JASPAR yes 118496790
chr1 243997120 243997126 PEA3 TRANSFAC yes 118496791
chr1 243997120 243997141 ZNF263 JASPAR yes 118496792
chr1 243997128 243997136 TBX15 JASPAR yes 118496793
chr1 243997128 243997139 E2F6 JASPAR yes 118496794
chr1 243997129 243997134 SP1 TRANSFAC yes 118496795
chr1 243997137 243997152 TFAP2A JASPAR yes 118496796
chr1 243997195 243997199 TEAD2 TRANSFAC yes 118496797
chr1 243997195 243997200 TBP TRANSFAC yes 118496798
chr1 243997195 243997201 TFIID TRANSFAC yes 118496799
chr1 243997197 243997203 TBP TRANSFAC yes 118496800
chr1 243997197 243997208 FOXC1 JASPAR yes 118496801
chr1 243997197 243997209 FOXC2 JASPAR yes 118496802
chr1 243997207 243997222 HNF1A JASPAR yes 118496803
chr1 243997208 243997221 HNF1B JASPAR yes 118496804
SNP sites on vista5870[chr1:243997018-243997244]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 243997019 rs10927082 C A no 1085236
chr1 243997053 rs201000809 T TA
TBP
1085237
chr1 243997146 rs12082361 G C
TFAP2A
1085238
chr1 243997167 rs548154957 G C,T no 1085239
chr1 243997222 rs141695684 C T
HNF1A
1085240
Genes possibly regulated by vista5870[chr1:243997018-243997244]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 243651535 244014381 - AKT3 ENSG00000117020.12 244014381 0.76 0.99 2001 82863
Expression level of Genes
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miRNAs possibly regulated by vista5870[chr1:243997018-243997244]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results