EnhancerDB
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  3. vista588[chr1:18973426-18973594]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista588[chr1:18973426-18973594]
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Tissue distribution of vista588
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Transcription factor that possibly regulate vista588[chr1:18973426-18973594]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 18973412 18973427 FOXA1 JASPAR yes 27148383
chr1 18973412 18973427 FOXA1 JASPAR yes 118242177
chr1 18973415 18973426 FOXB1 JASPAR yes 27148384
chr1 18973415 18973426 FOXC1 JASPAR yes 27148385
chr1 18973415 18973426 FOXB1 JASPAR yes 118242178
chr1 18973415 18973426 FOXC1 JASPAR yes 118242179
chr1 18973426 18973432 ZNF354C JASPAR yes 27148386
chr1 18973426 18973432 ZNF354C JASPAR yes 118242180
chr1 18973428 18973442 BATF3 JASPAR yes 27148387
chr1 18973428 18973442 BATF3 JASPAR yes 118242181
chr1 18973441 18973450 HIC2 JASPAR yes 27148388
chr1 18973441 18973450 HIC2 JASPAR yes 118242182
chr1 18973444 18973448 LFA1 TRANSFAC yes 27148389
chr1 18973444 18973448 LFA1 TRANSFAC yes 118242183
chr1 18973454 18973475 ZNF263 JASPAR yes 27148390
chr1 18973454 18973475 ZNF263 JASPAR yes 118242184
chr1 18973456 18973468 TFAP2A JASPAR yes 27148391
chr1 18973456 18973468 TFAP2A JASPAR yes 118242185
chr1 18973456 18973476 RREB1 JASPAR yes 27148392
chr1 18973456 18973476 RREB1 JASPAR yes 118242186
chr1 18973457 18973466 TFAP2A JASPAR yes 27148393
chr1 18973457 18973466 TFAP2A JASPAR yes 118242187
chr1 18973457 18973477 RREB1 JASPAR yes 27148394
chr1 18973457 18973477 RREB1 JASPAR yes 118242188
chr1 18973458 18973478 RREB1 JASPAR yes 27148395
chr1 18973458 18973478 RREB1 JASPAR yes 118242189
chr1 18973459 18973479 RREB1 JASPAR yes 27148396
chr1 18973459 18973479 RREB1 JASPAR yes 118242190
chr1 18973461 18973471 SP1 JASPAR yes 27148397
chr1 18973461 18973471 SP1 JASPAR yes 118242191
chr1 18973461 18973481 RREB1 JASPAR yes 27148398
chr1 18973461 18973481 RREB1 JASPAR yes 118242192
chr1 18973461 18973482 ZNF263 JASPAR yes 27148399
chr1 18973461 18973482 ZNF263 JASPAR yes 118242193
chr1 18973462 18973472 SP1 JASPAR yes 27148400
chr1 18973462 18973472 SP1 JASPAR yes 118242194
chr1 18973462 18973482 RREB1 JASPAR yes 27148401
chr1 18973462 18973482 RREB1 JASPAR yes 118242195
chr1 18973464 18973469 SP1 TRANSFAC yes 27148402
chr1 18973464 18973469 SP1 TRANSFAC yes 118242196
chr1 18973469 18973474 SP1 TRANSFAC yes 27148403
chr1 18973469 18973474 SP1 TRANSFAC yes 118242197
chr1 18973469 18973479 ZNF740 JASPAR yes 27148404
chr1 18973469 18973479 ZNF740 JASPAR yes 118242198
chr1 18973469 18973489 RREB1 JASPAR yes 27148405
chr1 18973469 18973489 RREB1 JASPAR yes 118242199
chr1 18973470 18973480 ZNF740 JASPAR yes 27148406
chr1 18973470 18973480 ZNF740 JASPAR yes 118242200
chr1 18973473 18973483 SP1 JASPAR yes 27148407
chr1 18973473 18973483 SP1 JASPAR yes 118242201
chr1 18973474 18973484 SP1 JASPAR yes 27148408
chr1 18973474 18973484 SP1 JASPAR yes 118242202
chr1 18973476 18973482 MAZ TRANSFAC yes 27148409
chr1 18973476 18973482 MAZ TRANSFAC yes 118242203
chr1 18973485 18973490 SP1 TRANSFAC yes 27148410
chr1 18973485 18973490 SP1 TRANSFAC yes 118242204
chr1 18973485 18973499 PLAG1 JASPAR yes 27148411
chr1 18973485 18973499 PLAG1 JASPAR yes 118242205
chr1 18973487 18973498 TFAP2A JASPAR yes 27148412
chr1 18973487 18973498 TFAP2B JASPAR yes 27148413
chr1 18973487 18973498 TFAP2A JASPAR yes 118242206
chr1 18973487 18973498 TFAP2B JASPAR yes 118242207
chr1 18973491 18973501 SP1 JASPAR yes 27148414
chr1 18973491 18973501 SP1 JASPAR yes 118242208
chr1 18973492 18973502 SP1 JASPAR yes 27148415
chr1 18973492 18973502 SP1 JASPAR yes 118242209
chr1 18973493 18973498 SP1 TRANSFAC yes 27148416
chr1 18973493 18973498 SP1 TRANSFAC yes 118242210
chr1 18973494 18973499 SP1 TRANSFAC yes 27148417
chr1 18973494 18973499 SP1 TRANSFAC yes 118242211
chr1 18973494 18973500 SP1 TRANSFAC yes 27148418
chr1 18973494 18973500 SP1 TRANSFAC yes 118242212
chr1 18973501 18973513 ELF4 JASPAR yes 27148419
chr1 18973501 18973513 ELF4 JASPAR yes 118242213
chr1 18973506 18973516 SP1 JASPAR yes 27148420
chr1 18973506 18973516 SP1 JASPAR yes 118242214
chr1 18973506 18973527 ZNF263 JASPAR yes 27148421
chr1 18973506 18973527 ZNF263 JASPAR yes 118242215
chr1 18973507 18973517 SP1 JASPAR yes 27148422
chr1 18973507 18973517 SP1 JASPAR yes 118242216
chr1 18973509 18973514 SP1 TRANSFAC yes 27148423
chr1 18973509 18973514 SP1 TRANSFAC yes 118242217
chr1 18973514 18973519 SP1 TRANSFAC yes 27148424
chr1 18973514 18973519 SP1 TRANSFAC yes 118242218
chr1 18973514 18973535 ZNF263 JASPAR yes 27148425
chr1 18973514 18973535 ZNF263 JASPAR yes 118242219
chr1 18973517 18973527 SP1 JASPAR yes 27148426
chr1 18973517 18973527 SP1 JASPAR yes 118242220
chr1 18973517 18973538 ZNF263 JASPAR yes 27148427
chr1 18973517 18973538 ZNF263 JASPAR yes 118242221
chr1 18973518 18973539 ZNF263 JASPAR yes 27148428
chr1 18973518 18973539 ZNF263 JASPAR yes 118242222
chr1 18973519 18973524 ETS2 TRANSFAC yes 27148429
chr1 18973519 18973524 ETS2 TRANSFAC yes 118242223
chr1 18973523 18973544 ZNF263 JASPAR yes 27148430
chr1 18973523 18973544 ZNF263 JASPAR yes 118242224
chr1 18973529 18973539 MZF1 JASPAR yes 27148431
chr1 18973529 18973539 MZF1 JASPAR yes 118242225
chr1 18973529 18973544 NR2C2 JASPAR yes 27148432
chr1 18973529 18973544 NR2C2 JASPAR yes 118242226
chr1 18973532 18973541 SP1 TRANSFAC yes 27148433
chr1 18973532 18973541 SP1 TRANSFAC yes 118242227
chr1 18973532 18973542 SP1 JASPAR yes 27148434
chr1 18973532 18973542 SP1 JASPAR yes 118242228
chr1 18973534 18973540 MAZ TRANSFAC yes 27148435
chr1 18973534 18973540 MAZ TRANSFAC yes 118242229
chr1 18973542 18973557 ZBTB33 JASPAR yes 27148436
chr1 18973542 18973557 ZBTB33 JASPAR yes 118242230
chr1 18973547 18973558 E2F1 JASPAR yes 27148437
chr1 18973547 18973558 E2F1 JASPAR yes 118242231
chr1 18973548 18973559 E2F4 JASPAR yes 27148438
chr1 18973548 18973559 E2F6 JASPAR yes 27148439
chr1 18973548 18973559 E2F4 JASPAR yes 118242232
chr1 18973548 18973559 E2F6 JASPAR yes 118242233
chr1 18973552 18973557 ETS2 TRANSFAC yes 27148440
chr1 18973552 18973557 ETS2 TRANSFAC yes 118242234
chr1 18973556 18973566 SP1 JASPAR yes 27148441
chr1 18973556 18973566 SP1 JASPAR yes 118242235
chr1 18973557 18973565 SP1 TRANSFAC yes 27148442
chr1 18973557 18973565 SP1 TRANSFAC yes 118242236
chr1 18973558 18973563 SP1 TRANSFAC yes 27148443
chr1 18973558 18973563 SP1 TRANSFAC yes 118242237
chr1 18973559 18973564 SP1 TRANSFAC yes 27148444
chr1 18973559 18973564 SP1 TRANSFAC yes 118242238
chr1 18973559 18973565 SP1 TRANSFAC yes 27148445
chr1 18973559 18973565 SP1 TRANSFAC yes 118242239
chr1 18973586 18973606 RREB1 JASPAR yes 27148446
chr1 18973586 18973606 RREB1 JASPAR yes 118242240
chr1 18973588 18973608 RREB1 JASPAR yes 27148447
chr1 18973588 18973608 RREB1 JASPAR yes 118242241
chr1 18973589 18973604 RUNX2 JASPAR yes 27148448
chr1 18973589 18973604 RUNX2 JASPAR yes 118242242
SNP sites on vista588[chr1:18973426-18973594]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 18973447 rs192878265 G C
HIC2 LFA1
126183
chr1 18973580 rs184271536 A T no 126184
chr1 18973585 rs370844969 G A no 126185
Genes possibly regulated by vista588[chr1:18973426-18973594]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 18957500 19075360 + PAX7 ENSG00000009709.7 18957500 0.98 1.0 251 84074
Expression level of Genes
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miRNAs possibly regulated by vista588[chr1:18973426-18973594]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results