EnhancerDB
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  3. vista5886[chr1:244459696-244459909]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5886[chr1:244459696-244459909]
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Tissue distribution of vista5886
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Transcription factor that possibly regulate vista5886[chr1:244459696-244459909]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244459697 244459702 ETS2 TRANSFAC yes 36724861
chr1 244459697 244459702 ETS2 TRANSFAC yes 118497755
chr1 244459708 244459713 GATA2 JASPAR yes 36724862
chr1 244459708 244459713 GATA2 JASPAR yes 118497756
chr1 244459710 244459723 POU3F3 JASPAR yes 36724863
chr1 244459710 244459723 POU3F3 JASPAR yes 118497757
chr1 244459716 244459721 GATA2 JASPAR yes 36724864
chr1 244459716 244459721 GATA2 JASPAR yes 118497758
chr1 244459728 244459733 GATA2 JASPAR yes 36724865
chr1 244459728 244459733 GATA2 JASPAR yes 118497759
chr1 244459737 244459748 USF1 JASPAR yes 36724866
chr1 244459737 244459748 USF2 JASPAR yes 36724867
chr1 244459737 244459748 USF1 JASPAR yes 118497760
chr1 244459737 244459748 USF2 JASPAR yes 118497761
chr1 244459761 244459772 USF2 JASPAR yes 36724868
chr1 244459761 244459772 USF2 JASPAR yes 118497762
chr1 244459762 244459769 USF2 TRANSFAC yes 36724869
chr1 244459762 244459769 USF2 TRANSFAC yes 118497763
chr1 244459762 244459772 SREBF2 JASPAR yes 36724870
chr1 244459762 244459772 SREBF2 JASPAR yes 118497764
chr1 244459764 244459769 USF2 TRANSFAC yes 36724871
chr1 244459764 244459769 USF2 TRANSFAC yes 118497765
chr1 244459765 244459771 PTF TRANSFAC yes 36724872
chr1 244459765 244459771 PTF TRANSFAC yes 118497766
chr1 244459778 244459782 YY1 TRANSFAC yes 36724873
chr1 244459778 244459782 YY1 TRANSFAC yes 118497767
chr1 244459798 244459816 MAFF JASPAR yes 36724874
chr1 244459798 244459816 MAFF JASPAR yes 118497768
chr1 244459808 244459812 YY1 TRANSFAC yes 36724875
chr1 244459808 244459812 YY1 TRANSFAC yes 118497769
chr1 244459817 244459825 EHF JASPAR yes 36724876
chr1 244459817 244459825 EHF JASPAR yes 118497770
chr1 244459819 244459824 ETS2 TRANSFAC yes 36724877
chr1 244459819 244459824 ETS2 TRANSFAC yes 118497771
chr1 244459850 244459861 USF1 JASPAR yes 36724878
chr1 244459850 244459861 USF2 JASPAR yes 36724879
chr1 244459850 244459861 USF1 JASPAR yes 118497772
chr1 244459850 244459861 USF2 JASPAR yes 118497773
chr1 244459851 244459861 MAX JASPAR yes 36724880
chr1 244459851 244459861 MAX JASPAR yes 118497774
chr1 244459875 244459889 GATA2 JASPAR yes 36724881
chr1 244459875 244459889 GATA2 JASPAR yes 118497775
chr1 244459877 244459885 GATA3 JASPAR yes 36724882
chr1 244459877 244459885 GATA5 JASPAR yes 36724883
chr1 244459877 244459885 GATA3 JASPAR yes 118497776
chr1 244459877 244459885 GATA5 JASPAR yes 118497777
SNP sites on vista5886[chr1:244459696-244459909]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244459701 rs199650142 GA G
ETS2
1088705
chr1 244459745 rs111761664 T C
USF1 USF2
1088706
chr1 244459783 rs678004 T G no 1088707
chr1 244459795 rs187239975 C T no 1088708
chr1 244459864 rs191683410 T A no 1088709
Genes possibly regulated by vista5886[chr1:244459696-244459909]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 43972
Expression level of Genes
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miRNAs possibly regulated by vista5886[chr1:244459696-244459909]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results