EnhancerDB
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  3. vista5888[chr1:244466323-244466598]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5888[chr1:244466323-244466598]
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Tissue distribution of vista5888
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Transcription factor that possibly regulate vista5888[chr1:244466323-244466598]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244466088 244466628 EP300 UCSC Txn Factor no Conserved 107888324
chr1 244466230 244466614 USF1 UCSC Txn Factor no Conserved 107888343
chr1 244466375 244466589 TEAD4 UCSC Txn Factor no Conserved 107888374
chr1 244466391 244466577 NR2F2 UCSC Txn Factor no Conserved 107888378
chr1 244466406 244466551 TAL1 UCSC Txn Factor no Conserved 107888381
chr1 244466318 244466329 GCM1 JASPAR yes 36725729
chr1 244466318 244466329 GCM1 JASPAR yes 118497832
chr1 244466335 244466340 ETS2 TRANSFAC yes 36725730
chr1 244466335 244466340 ETS2 TRANSFAC yes 118497833
chr1 244466340 244466350 TEAD1 JASPAR yes 36725731
chr1 244466340 244466350 TEAD4 JASPAR yes 36725732
chr1 244466340 244466350 TEAD1 JASPAR yes 118497834
chr1 244466340 244466350 TEAD4 JASPAR yes 118497835
chr1 244466341 244466349 TEAD3 JASPAR yes 36725733
chr1 244466341 244466349 TEAD3 JASPAR yes 118497836
chr1 244466358 244466369 FOXH1 JASPAR yes 36725734
chr1 244466358 244466369 FOXH1 JASPAR yes 118497837
chr1 244466406 244466427 REST JASPAR yes 36725735
chr1 244466406 244466427 REST JASPAR yes 118497838
chr1 244466422 244466426 LFA1 TRANSFAC yes 36725736
chr1 244466422 244466426 LFA1 TRANSFAC yes 118497839
chr1 244466426 244466431 SP1 TRANSFAC yes 36725737
chr1 244466426 244466431 SP1 TRANSFAC yes 118497840
chr1 244466431 244466445 PLAG1 JASPAR yes 36725738
chr1 244466431 244466445 PLAG1 JASPAR yes 118497841
chr1 244466432 244466452 ESR1 JASPAR yes 36725739
chr1 244466432 244466452 ESR1 JASPAR yes 118497842
chr1 244466435 244466453 RARA JASPAR yes 36725740
chr1 244466435 244466453 RARA JASPAR yes 118497843
chr1 244466436 244466453 ESR1 JASPAR yes 36725741
chr1 244466436 244466453 ESR1 JASPAR yes 118497844
chr1 244466436 244466454 ESR2 JASPAR yes 36725742
chr1 244466436 244466454 ESR2 JASPAR yes 118497845
chr1 244466437 244466452 ESR2 JASPAR yes 36725743
chr1 244466437 244466452 ESR2 JASPAR yes 118497846
chr1 244466446 244466456 RORA JASPAR yes 36725744
chr1 244466446 244466456 RORA JASPAR yes 118497847
chr1 244466448 244466460 TEAD1 JASPAR yes 36725745
chr1 244466448 244466460 TEAD1 JASPAR yes 118497848
chr1 244466450 244466460 TEAD4 JASPAR yes 36725746
chr1 244466450 244466460 TEAD4 JASPAR yes 118497849
chr1 244466451 244466459 TEAD3 JASPAR yes 36725747
chr1 244466451 244466459 TEAD3 JASPAR yes 118497850
chr1 244466457 244466467 SREBF1 JASPAR yes 36725748
chr1 244466457 244466467 SREBF2 JASPAR yes 36725749
chr1 244466457 244466467 SREBF1 JASPAR yes 118497851
chr1 244466457 244466467 SREBF2 JASPAR yes 118497852
chr1 244466460 244466477 RARA JASPAR yes 36725750
chr1 244466460 244466477 RARA JASPAR yes 118497853
chr1 244466468 244466478 MLXIPL JASPAR yes 36725751
chr1 244466468 244466478 SREBF1 JASPAR yes 36725752
chr1 244466468 244466478 SREBF2 JASPAR yes 36725753
chr1 244466468 244466478 TFAP4 JASPAR yes 36725754
chr1 244466468 244466478 TFEC JASPAR yes 36725755
chr1 244466468 244466478 MLXIPL JASPAR yes 118497854
chr1 244466468 244466478 SREBF1 JASPAR yes 118497855
chr1 244466468 244466478 SREBF2 JASPAR yes 118497856
chr1 244466468 244466478 TFAP4 JASPAR yes 118497857
chr1 244466468 244466478 TFEC JASPAR yes 118497858
chr1 244466478 244466482 ESR1 TRANSFAC yes 36725756
chr1 244466478 244466482 ESR1 TRANSFAC yes 118497859
chr1 244466482 244466494 PKNOX2 JASPAR yes 36725757
chr1 244466482 244466494 TGIF2 JASPAR yes 36725758
chr1 244466482 244466494 PKNOX2 JASPAR yes 118497860
chr1 244466482 244466494 TGIF2 JASPAR yes 118497861
chr1 244466485 244466490 MYC TRANSFAC yes 36725759
chr1 244466485 244466490 MYC TRANSFAC yes 118497862
chr1 244466496 244466500 NFE TRANSFAC yes 36725760
chr1 244466496 244466500 NFE TRANSFAC yes 118497863
chr1 244466505 244466519 GATA2 JASPAR yes 36725761
chr1 244466505 244466519 GATA2 JASPAR yes 118497864
chr1 244466507 244466514 GATA3 TRANSFAC yes 36725762
chr1 244466507 244466514 GATA3 TRANSFAC yes 118497865
chr1 244466507 244466515 GATA5 JASPAR yes 36725763
chr1 244466507 244466515 GATA5 JASPAR yes 118497866
chr1 244466510 244466513 MYB TRANSFAC yes 36725764
chr1 244466510 244466513 MYB TRANSFAC yes 118497867
chr1 244466511 244466521 MYF6 JASPAR yes 36725765
chr1 244466511 244466521 MYF6 JASPAR yes 118497868
chr1 244466518 244466522 ESR1 TRANSFAC yes 36725766
chr1 244466518 244466522 ESR1 TRANSFAC yes 118497869
chr1 244466530 244466541 EBF1 JASPAR yes 36725767
chr1 244466530 244466541 EBF1 JASPAR yes 118497870
chr1 244466548 244466562 EBF1 JASPAR yes 36725768
chr1 244466548 244466562 EBF1 JASPAR yes 118497871
chr1 244466549 244466560 EBF1 JASPAR yes 36725769
chr1 244466549 244466560 EBF1 JASPAR yes 118497872
chr1 244466550 244466561 EBF1 JASPAR yes 36725770
chr1 244466550 244466561 EBF1 JASPAR yes 118497873
chr1 244466563 244466578 IRF9 JASPAR yes 36725771
chr1 244466563 244466578 IRF9 JASPAR yes 118497874
chr1 244466565 244466579 STAT1 JASPAR yes 36725772
chr1 244466565 244466579 STAT1 JASPAR yes 118497875
chr1 244466565 244466580 STAT2 JASPAR yes 36725773
chr1 244466565 244466580 STAT2 JASPAR yes 118497876
SNP sites on vista5888[chr1:244466323-244466598]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244466366 rs3127471 T A
EP300 FOXH1 USF1
1088840
chr1 244466447 rs192537943 T C
EP300 ESR1 ESR2 NR2F2 RARA RORA TAL1 TEAD4 USF1
1088841
Genes possibly regulated by vista5888[chr1:244466323-244466598]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 50661
Expression level of Genes
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miRNAs possibly regulated by vista5888[chr1:244466323-244466598]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results