EnhancerDB
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  3. vista5889[chr1:244467525-244467677]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5889[chr1:244467525-244467677]
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Tissue distribution of vista5889
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Transcription factor that possibly regulate vista5889[chr1:244467525-244467677]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244467454 244468056 TFAP2C UCSC Txn Factor no Conserved 107888392
chr1 244467525 244467536 CEBPA JASPAR yes 36725903
chr1 244467525 244467536 CEBPA JASPAR yes 118497877
chr1 244467541 244467552 NRF1 JASPAR yes 36725904
chr1 244467541 244467552 NRF1 JASPAR yes 118497878
chr1 244467547 244467568 ZNF263 JASPAR yes 36725905
chr1 244467547 244467568 ZNF263 JASPAR yes 118497879
chr1 244467559 244467574 TFAP2C JASPAR yes 36725906
chr1 244467559 244467574 TFAP2C JASPAR yes 118497880
chr1 244467561 244467572 TFAP2B JASPAR yes 36725907
chr1 244467561 244467572 TFAP2B JASPAR yes 118497881
chr1 244467561 244467574 TFAP2A JASPAR yes 36725908
chr1 244467561 244467574 TFAP2B JASPAR yes 36725909
chr1 244467561 244467574 TFAP2C JASPAR yes 36725910
chr1 244467561 244467574 TFAP2A JASPAR yes 118497882
chr1 244467561 244467574 TFAP2B JASPAR yes 118497883
chr1 244467561 244467574 TFAP2C JASPAR yes 118497884
chr1 244467569 244467573 LFA1 TRANSFAC yes 36725911
chr1 244467569 244467573 LFA1 TRANSFAC yes 118497885
chr1 244467589 244467597 FOXO3 JASPAR yes 36725912
chr1 244467589 244467597 FOXO3 JASPAR yes 118497886
chr1 244467589 244467599 NFATC3 JASPAR yes 36725913
chr1 244467589 244467599 NFATC3 JASPAR yes 118497887
chr1 244467594 244467608 POU1F1 JASPAR yes 36725914
chr1 244467594 244467608 POU1F1 JASPAR yes 118497888
chr1 244467596 244467608 POU2F1 JASPAR yes 36725915
chr1 244467596 244467608 POU2F1 JASPAR yes 118497889
chr1 244467597 244467606 POU3F4 JASPAR yes 36725916
chr1 244467597 244467606 POU5F1B JASPAR yes 36725917
chr1 244467597 244467606 POU3F4 JASPAR yes 118497890
chr1 244467597 244467606 POU5F1B JASPAR yes 118497891
chr1 244467611 244467614 MYB TRANSFAC yes 36725918
chr1 244467611 244467614 MYB TRANSFAC yes 118497892
chr1 244467611 244467624 ELF3 JASPAR yes 36725919
chr1 244467611 244467624 ELF3 JASPAR yes 118497893
chr1 244467612 244467623 ELF5 JASPAR yes 36725920
chr1 244467612 244467623 ELF5 JASPAR yes 118497894
chr1 244467612 244467625 ELF1 JASPAR yes 36725921
chr1 244467612 244467625 ELF1 JASPAR yes 118497895
chr1 244467613 244467620 SPI1 JASPAR yes 36725922
chr1 244467613 244467620 SPI1 JASPAR yes 118497896
chr1 244467613 244467621 FEV JASPAR yes 36725923
chr1 244467613 244467621 FEV JASPAR yes 118497897
chr1 244467615 244467620 ETS2 TRANSFAC yes 36725924
chr1 244467615 244467620 ETS2 TRANSFAC yes 118497898
chr1 244467623 244467629 NFE2 TRANSFAC yes 36725925
chr1 244467623 244467629 NFE2 TRANSFAC yes 118497899
chr1 244467626 244467640 PLAG1 JASPAR yes 36725926
chr1 244467626 244467640 PLAG1 JASPAR yes 118497900
chr1 244467640 244467645 SP1 TRANSFAC yes 36725927
chr1 244467640 244467645 SP1 TRANSFAC yes 118497901
SNP sites on vista5889[chr1:244467525-244467677]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244467614 rs60358509 A T
ELF1 ELF3 ELF5 FEV MYB SPI1 TFAP2C
1088853
chr1 244467636 rs3102470 G C
PLAG1 TFAP2C
1088854
chr1 244467663 rs78348321 G A
TFAP2C
1088855
chr1 244467664 rs142862284 C T
TFAP2C
1088856
Genes possibly regulated by vista5889[chr1:244467525-244467677]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 51740
Expression level of Genes
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miRNAs possibly regulated by vista5889[chr1:244467525-244467677]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results