EnhancerDB
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  3. vista5895[chr1:244518180-244518394]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5895[chr1:244518180-244518394]
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Tissue distribution of vista5895
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Transcription factor that possibly regulate vista5895[chr1:244518180-244518394]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244517992 244518542 GATA2 UCSC Txn Factor no Conserved 107888559
chr1 244518086 244518436 STAT5A UCSC Txn Factor no Conserved 107888570
chr1 244518096 244518452 RCOR1 UCSC Txn Factor no Conserved 107888572
chr1 244518101 244518388 TEAD4 UCSC Txn Factor no Conserved 107888576
chr1 244518115 244518431 EP300 UCSC Txn Factor no Conserved 107888582
chr1 244518126 244518391 TAL1 UCSC Txn Factor no Conserved 107888584
chr1 244518148 244518468 YY1 UCSC Txn Factor no Conserved 107888591
chr1 244518152 244518353 PML UCSC Txn Factor no Conserved 107888592
chr1 244518186 244518322 NR2F2 UCSC Txn Factor no Conserved 107888596
chr1 244518186 244518438 USF1 UCSC Txn Factor no Conserved 107888599
chr1 244518228 244518370 BHLHE40 UCSC Txn Factor no Conserved 107888600
chr1 244518186 244518192 TCF4 TRANSFAC yes 118498269
chr1 244518203 244518219 SOX4 JASPAR yes 118498270
chr1 244518218 244518230 MEF2A JASPAR yes 118498271
chr1 244518219 244518235 POU4F2 JASPAR yes 118498272
chr1 244518219 244518235 POU4F3 JASPAR yes 118498273
chr1 244518221 244518235 POU4F1 JASPAR yes 118498274
chr1 244518256 244518274 RARA JASPAR yes 118498275
chr1 244518262 244518266 YY1 TRANSFAC yes 118498276
chr1 244518288 244518300 YY1 JASPAR yes 118498277
chr1 244518290 244518301 YY2 JASPAR yes 118498278
chr1 244518302 244518312 MAX JASPAR yes 118498279
chr1 244518302 244518313 USF1 JASPAR yes 118498280
chr1 244518302 244518313 USF2 JASPAR yes 118498281
chr1 244518302 244518316 XBP1 JASPAR yes 118498282
chr1 244518303 244518313 BHLHE40 JASPAR yes 118498283
chr1 244518303 244518313 BHLHE41 JASPAR yes 118498284
chr1 244518303 244518313 MAX JASPAR yes 118498285
chr1 244518303 244518313 MLXIPL JASPAR yes 118498286
chr1 244518303 244518313 MLX JASPAR yes 118498287
chr1 244518303 244518313 MNT JASPAR yes 118498288
chr1 244518303 244518313 SREBF2 JASPAR yes 118498289
chr1 244518303 244518313 TFE3 JASPAR yes 118498290
chr1 244518303 244518313 TFEB JASPAR yes 118498291
chr1 244518303 244518313 TFEC JASPAR yes 118498292
chr1 244518303 244518314 USF1 JASPAR yes 118498293
chr1 244518304 244518314 MAX JASPAR yes 118498294
chr1 244518305 244518310 MYC TRANSFAC yes 118498295
chr1 244518305 244518310 USF1 TRANSFAC yes 118498296
chr1 244518305 244518310 USF2 TRANSFAC yes 118498297
chr1 244518324 244518335 ELK4 JASPAR yes 118498298
chr1 244518324 244518335 FLI1 JASPAR yes 118498299
chr1 244518325 244518329 YY1 TRANSFAC yes 118498300
chr1 244518325 244518335 ERF JASPAR yes 118498301
chr1 244518325 244518335 ERG JASPAR yes 118498302
chr1 244518325 244518335 ETS1 JASPAR yes 118498303
chr1 244518325 244518335 FEV JASPAR yes 118498304
chr1 244518325 244518335 FLI1 JASPAR yes 118498305
chr1 244518325 244518336 ETV2 JASPAR yes 118498306
chr1 244518325 244518338 ELF1 JASPAR yes 118498307
chr1 244518326 244518334 FEV JASPAR yes 118498308
chr1 244518348 244518352 ESR1 TRANSFAC yes 118498309
chr1 244518361 244518366 MYC TRANSFAC yes 118498310
chr1 244518377 244518383 TCF4 TRANSFAC yes 118498311
SNP sites on vista5895[chr1:244518180-244518394]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244518298 rs7544768 G A
BHLHE40 EP300 GATA2 NR2F2 PML RCOR1 STAT5A TAL1 TEAD4 USF1 YY1 YY2
1089445
chr1 244518308 rs12095066 C T
BHLHE40 BHLHE41 EP300 GATA2 MAX MLX MLXIPL MNT MYC NR2F2 PML RCOR1 SREBF2 STAT5A TAL1 TEAD4 TFE3 TFEB TFEC USF1 USF2 XBP1 YY1
1089446
Genes possibly regulated by vista5895[chr1:244518180-244518394]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 97757
chr1 244571796 244615436 - ADSS ENSG00000035687.9 244615436 0.61 0.98 2005 2958
chr1 244617679 244804479 + C1orf101 ENSG00000179397.13 244617679 0.75 0.99 2006 715
Expression level of Genes
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miRNAs possibly regulated by vista5895[chr1:244518180-244518394]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results