EnhancerDB
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  3. vista5897[chr1:244532902-244533005]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5897[chr1:244532902-244533005]
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Tissue distribution of vista5897
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Transcription factor that possibly regulate vista5897[chr1:244532902-244533005]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244532888 244532904 GLIS1 JASPAR yes 36730821
chr1 244532888 244532904 GLIS1 JASPAR yes 118498325
chr1 244532907 244532911 H4TF2 TRANSFAC yes 36730822
chr1 244532907 244532911 H4TF2 TRANSFAC yes 118498326
chr1 244532909 244532920 EBF1 JASPAR yes 36730823
chr1 244532909 244532920 EBF1 JASPAR yes 118498327
chr1 244532915 244532924 NKX2-8 JASPAR yes 36730824
chr1 244532915 244532924 NKX2-8 JASPAR yes 118498328
chr1 244532926 244532936 HOXD13 JASPAR yes 36730825
chr1 244532926 244532936 HOXD13 JASPAR yes 118498329
chr1 244532926 244532937 HOXA10 JASPAR yes 36730826
chr1 244532926 244532937 HOXA10 JASPAR yes 118498330
chr1 244532927 244532938 CDX2 JASPAR yes 36730827
chr1 244532927 244532938 CDX2 JASPAR yes 118498331
chr1 244532930 244532934 TEAD2 TRANSFAC yes 36730828
chr1 244532930 244532934 TEAD2 TRANSFAC yes 118498332
chr1 244532932 244532935 MYB TRANSFAC yes 36730829
chr1 244532932 244532935 MYB TRANSFAC yes 118498333
chr1 244532956 244532969 POU2F2 JASPAR yes 36730830
chr1 244532956 244532969 POU2F2 JASPAR yes 118498334
chr1 244532956 244532970 POU1F1 JASPAR yes 36730831
chr1 244532956 244532970 POU1F1 JASPAR yes 118498335
chr1 244532957 244532969 POU3F1 JASPAR yes 36730832
chr1 244532957 244532969 POU3F2 JASPAR yes 36730833
chr1 244532957 244532969 POU3F1 JASPAR yes 118498336
chr1 244532957 244532969 POU3F2 JASPAR yes 118498337
chr1 244532958 244532970 POU2F1 JASPAR yes 36730834
chr1 244532958 244532970 POU2F1 JASPAR yes 118498338
chr1 244532959 244532968 POU3F4 JASPAR yes 36730835
chr1 244532959 244532968 POU5F1B JASPAR yes 36730836
chr1 244532959 244532968 POU3F4 JASPAR yes 118498339
chr1 244532959 244532968 POU5F1B JASPAR yes 118498340
chr1 244532960 244532968 FOXL1 JASPAR yes 36730837
chr1 244532960 244532968 FOXL1 JASPAR yes 118498341
chr1 244532968 244532972 LFA1 TRANSFAC yes 36730838
chr1 244532968 244532972 LFA1 TRANSFAC yes 118498342
chr1 244532978 244532983 NFY TRANSFAC yes 36730839
chr1 244532978 244532983 NFY TRANSFAC yes 118498343
chr1 244532988 244532998 FIGLA JASPAR yes 36730840
chr1 244532988 244532998 ID4 JASPAR yes 36730841
chr1 244532988 244532998 TCF3 JASPAR yes 36730842
chr1 244532988 244532998 TCF4 JASPAR yes 36730843
chr1 244532988 244532998 FIGLA JASPAR yes 118498344
chr1 244532988 244532998 ID4 JASPAR yes 118498345
chr1 244532988 244532998 TCF3 JASPAR yes 118498346
chr1 244532988 244532998 TCF4 JASPAR yes 118498347
chr1 244532990 244532999 ZEB1 JASPAR yes 36730844
chr1 244532990 244532999 ZEB1 JASPAR yes 118498348
chr1 244532997 244533010 POU2F2 JASPAR yes 36730845
chr1 244532997 244533010 POU2F2 JASPAR yes 118498349
chr1 244532997 244533011 POU1F1 JASPAR yes 36730846
chr1 244532997 244533011 POU1F1 JASPAR yes 118498350
chr1 244532998 244533010 POU3F1 JASPAR yes 36730847
chr1 244532998 244533010 POU3F2 JASPAR yes 36730848
chr1 244532998 244533010 POU3F1 JASPAR yes 118498351
chr1 244532998 244533010 POU3F2 JASPAR yes 118498352
chr1 244532998 244533011 POU3F3 JASPAR yes 36730849
chr1 244532998 244533011 POU3F3 JASPAR yes 118498353
chr1 244532999 244533003 YY1 TRANSFAC yes 36730850
chr1 244532999 244533003 YY1 TRANSFAC yes 118498354
chr1 244532999 244533011 POU2F1 JASPAR yes 36730851
chr1 244532999 244533011 POU2F1 JASPAR yes 118498355
chr1 244533000 244533007 POU2F1 TRANSFAC yes 36730852
chr1 244533000 244533007 POU2F2C TRANSFAC yes 36730853
chr1 244533000 244533007 POU2F2 TRANSFAC yes 36730854
chr1 244533000 244533007 POU2F1 TRANSFAC yes 118498356
chr1 244533000 244533007 POU2F2C TRANSFAC yes 118498357
chr1 244533000 244533007 POU2F2 TRANSFAC yes 118498358
chr1 244533000 244533008 POU2F1 TRANSFAC yes 36730855
chr1 244533000 244533008 POU2F1 TRANSFAC yes 118498359
chr1 244533000 244533009 POU3F4 JASPAR yes 36730856
chr1 244533000 244533009 POU5F1B JASPAR yes 36730857
chr1 244533000 244533009 POU3F4 JASPAR yes 118498360
chr1 244533000 244533009 POU5F1B JASPAR yes 118498361
SNP sites on vista5897[chr1:244532902-244533005]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244532937 rs3123705 C T
CDX2 HOXA10
1089614
chr1 244532963 rs10927221 T C
FOXL1 POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F4 POU5F1B
1089615
Genes possibly regulated by vista5897[chr1:244532902-244533005]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 83035
chr1 244571796 244615436 - ADSS ENSG00000035687.9 244615436 0.61 0.98 2005 17569
chr1 244617679 244804479 + C1orf101 ENSG00000179397.13 244617679 0.75 0.99 2006 15326
Expression level of Genes
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miRNAs possibly regulated by vista5897[chr1:244532902-244533005]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results