EnhancerDB
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  3. vista5898[chr1:244535063-244535306]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5898[chr1:244535063-244535306]
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Tissue distribution of vista5898
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Transcription factor that possibly regulate vista5898[chr1:244535063-244535306]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244535052 244535066 PLAG1 JASPAR yes 36731106
chr1 244535052 244535066 PLAG1 JASPAR yes 118498362
chr1 244535054 244535066 TFAP2A JASPAR yes 36731107
chr1 244535054 244535066 TFAP2B JASPAR yes 36731108
chr1 244535054 244535066 TFAP2A JASPAR yes 118498363
chr1 244535054 244535066 TFAP2B JASPAR yes 118498364
chr1 244535054 244535069 TFAP2A JASPAR yes 36731109
chr1 244535054 244535069 TFAP2C JASPAR yes 36731110
chr1 244535054 244535069 TFAP2A JASPAR yes 118498365
chr1 244535054 244535069 TFAP2C JASPAR yes 118498366
chr1 244535055 244535064 TFAP2A JASPAR yes 36731111
chr1 244535055 244535064 TFAP2A JASPAR yes 118498367
chr1 244535093 244535098 GATA2 JASPAR yes 36731112
chr1 244535093 244535098 GATA2 JASPAR yes 118498368
chr1 244535137 244535143 HiNF-A TRANSFAC yes 36731113
chr1 244535137 244535143 HiNF-A TRANSFAC yes 118498369
chr1 244535145 244535149 YY1 TRANSFAC yes 36731114
chr1 244535145 244535149 YY1 TRANSFAC yes 118498370
chr1 244535163 244535184 IRF1 JASPAR yes 36731115
chr1 244535163 244535184 IRF1 JASPAR yes 118498371
chr1 244535169 244535176 SPIB JASPAR yes 36731116
chr1 244535169 244535176 SPIB JASPAR yes 118498372
chr1 244535169 244535184 PRDM1 JASPAR yes 36731117
chr1 244535169 244535184 PRDM1 JASPAR yes 118498373
chr1 244535197 244535206 SOX9 JASPAR yes 36731118
chr1 244535197 244535206 SOX9 JASPAR yes 118498374
chr1 244535199 244535208 SRY JASPAR yes 36731119
chr1 244535199 244535208 SRY JASPAR yes 118498375
chr1 244535202 244535216 FOXF2 JASPAR yes 36731120
chr1 244535202 244535216 FOXF2 JASPAR yes 118498376
chr1 244535204 244535208 YY1 TRANSFAC yes 36731121
chr1 244535204 244535208 YY1 TRANSFAC yes 118498377
chr1 244535218 244535229 NFE2L2 JASPAR yes 36731122
chr1 244535218 244535229 NFE2L2 JASPAR yes 118498378
chr1 244535221 244535232 BATF JASPAR yes 36731123
chr1 244535221 244535232 BATF JASPAR yes 118498379
chr1 244535231 244535236 GATA2 JASPAR yes 36731124
chr1 244535231 244535236 GATA2 JASPAR yes 118498380
chr1 244535231 244535246 RFX5 JASPAR yes 36731125
chr1 244535231 244535246 RFX5 JASPAR yes 118498381
chr1 244535244 244535248 LFA1 TRANSFAC yes 36731126
chr1 244535244 244535248 LFA1 TRANSFAC yes 118498382
chr1 244535256 244535271 RUNX2 JASPAR yes 36731127
chr1 244535256 244535271 RUNX2 JASPAR yes 118498383
chr1 244535260 244535270 RUNX3 JASPAR yes 36731128
chr1 244535260 244535270 RUNX3 JASPAR yes 118498384
chr1 244535261 244535270 RUNX2 JASPAR yes 36731129
chr1 244535261 244535270 RUNX2 JASPAR yes 118498385
chr1 244535269 244535283 POU1F1 JASPAR yes 36731130
chr1 244535269 244535283 POU1F1 JASPAR yes 118498386
chr1 244535270 244535282 POU3F2 JASPAR yes 36731131
chr1 244535270 244535282 POU3F2 JASPAR yes 118498387
SNP sites on vista5898[chr1:244535063-244535306]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244535174 rs77751010 T C
IRF1 PRDM1 SPIB
1089643
chr1 244535241 rs141130141 C T
RFX5
1089644
Genes possibly regulated by vista5898[chr1:244535063-244535306]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244515937 244552965 + C1orf100 ENSG00000173728.6 244515937 0.83 1.0 2004 80874
chr1 244571796 244615436 - ADSS ENSG00000035687.9 244615436 0.61 0.98 2005 19870
chr1 244617679 244804479 + C1orf101 ENSG00000179397.13 244617679 0.75 0.99 2006 17627
Expression level of Genes
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miRNAs possibly regulated by vista5898[chr1:244535063-244535306]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results