EnhancerDB
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  3. vista5902[chr1:244894306-244894456]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5902[chr1:244894306-244894456]
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Tissue distribution of vista5902
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Transcription factor that possibly regulate vista5902[chr1:244894306-244894456]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 244894333 244894345 TEAD1 JASPAR yes 36741819
chr1 244894333 244894345 TEAD1 JASPAR yes 118498551
chr1 244894342 244894357 RUNX2 JASPAR yes 36741820
chr1 244894342 244894357 RUNX2 JASPAR yes 118498552
chr1 244894344 244894358 PLAG1 JASPAR yes 36741821
chr1 244894344 244894358 PLAG1 JASPAR yes 118498553
chr1 244894366 244894385 RFX2 JASPAR yes 36741822
chr1 244894366 244894385 RFX2 JASPAR yes 118498554
chr1 244894370 244894386 RFX2 JASPAR yes 36741823
chr1 244894370 244894386 RFX3 JASPAR yes 36741824
chr1 244894370 244894386 RFX4 JASPAR yes 36741825
chr1 244894370 244894386 RFX5 JASPAR yes 36741826
chr1 244894370 244894386 RFX2 JASPAR yes 118498555
chr1 244894370 244894386 RFX3 JASPAR yes 118498556
chr1 244894370 244894386 RFX4 JASPAR yes 118498557
chr1 244894370 244894386 RFX5 JASPAR yes 118498558
chr1 244894371 244894390 RFX2 JASPAR yes 36741827
chr1 244894371 244894390 RFX2 JASPAR yes 118498559
chr1 244894378 244894389 NFKB1 JASPAR yes 36741828
chr1 244894378 244894389 NFKB1 JASPAR yes 118498560
chr1 244894379 244894389 RELA JASPAR yes 36741829
chr1 244894379 244894389 REL JASPAR yes 36741830
chr1 244894379 244894389 RELA JASPAR yes 118498561
chr1 244894379 244894389 REL JASPAR yes 118498562
chr1 244894403 244894412 HIC2 JASPAR yes 36741831
chr1 244894403 244894412 HIC2 JASPAR yes 118498563
chr1 244894418 244894432 TLX1 JASPAR yes 36741832
chr1 244894418 244894432 TLX1 JASPAR yes 118498564
chr1 244894419 244894433 TLX1 JASPAR yes 36741833
chr1 244894419 244894433 TLX1 JASPAR yes 118498565
chr1 244894427 244894433 NFIC JASPAR yes 36741834
chr1 244894427 244894433 NFIC JASPAR yes 118498566
chr1 244894429 244894433 H1TF2 TRANSFAC yes 36741835
chr1 244894429 244894433 NFE TRANSFAC yes 36741836
chr1 244894429 244894433 SRF TRANSFAC yes 36741837
chr1 244894429 244894433 H1TF2 TRANSFAC yes 118498567
chr1 244894429 244894433 NFE TRANSFAC yes 118498568
chr1 244894429 244894433 SRF TRANSFAC yes 118498569
chr1 244894435 244894448 NR2F1 JASPAR yes 36741838
chr1 244894435 244894448 NR2F1 JASPAR yes 118498570
chr1 244894436 244894454 ESR1 JASPAR yes 36741839
chr1 244894436 244894454 ESR1 JASPAR yes 118498571
chr1 244894439 244894443 ESR1 TRANSFAC yes 36741840
chr1 244894439 244894443 ESR1 TRANSFAC yes 118498572
SNP sites on vista5902[chr1:244894306-244894456]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 244894324 rs544999708 C T no 1090711
chr1 244894416 rs550290517 G A no 1090712
chr1 244894431 rs560634239 C A
H1TF2 NFE NFIC SRF TLX1
1090713
chr1 244894456 rs566761575 C T no 1090714
Genes possibly regulated by vista5902[chr1:244894306-244894456]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244816237 244872335 + DESI2 ENSG00000121644.14 244816237 0.8 0.99 2007 21931
Expression level of Genes
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miRNAs possibly regulated by vista5902[chr1:244894306-244894456]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results