EnhancerDB
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  3. vista5906[chr1:245057262-245057513]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5906[chr1:245057262-245057513]
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Tissue distribution of vista5906
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Transcription factor that possibly regulate vista5906[chr1:245057262-245057513]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 245057251 245057264 ELF1 JASPAR yes 36749881
chr1 245057251 245057264 ELF1 JASPAR yes 118498721
chr1 245057252 245057264 EHF JASPAR yes 36749882
chr1 245057252 245057264 ELF1 JASPAR yes 36749883
chr1 245057252 245057264 ELF4 JASPAR yes 36749884
chr1 245057252 245057264 EHF JASPAR yes 118498722
chr1 245057252 245057264 ELF1 JASPAR yes 118498723
chr1 245057252 245057264 ELF4 JASPAR yes 118498724
chr1 245057252 245057265 ELF3 JASPAR yes 36749885
chr1 245057252 245057265 ELF3 JASPAR yes 118498725
chr1 245057253 245057264 ELF5 JASPAR yes 36749886
chr1 245057253 245057264 ELF5 JASPAR yes 118498726
chr1 245057254 245057264 ELK1 JASPAR yes 36749887
chr1 245057254 245057264 ELK3 JASPAR yes 36749888
chr1 245057254 245057264 ETV5 JASPAR yes 36749889
chr1 245057254 245057264 ETV6 JASPAR yes 36749890
chr1 245057254 245057264 GABPA JASPAR yes 36749891
chr1 245057254 245057264 ELK1 JASPAR yes 118498727
chr1 245057254 245057264 ELK3 JASPAR yes 118498728
chr1 245057254 245057264 ETV5 JASPAR yes 118498729
chr1 245057254 245057264 ETV6 JASPAR yes 118498730
chr1 245057254 245057264 GABPA JASPAR yes 118498731
chr1 245057254 245057265 ELK4 JASPAR yes 36749892
chr1 245057254 245057265 FLI1 JASPAR yes 36749893
chr1 245057254 245057265 ELK4 JASPAR yes 118498732
chr1 245057254 245057265 FLI1 JASPAR yes 118498733
chr1 245057256 245057262 ETS1 JASPAR yes 36749894
chr1 245057256 245057262 SPI1 JASPAR yes 36749895
chr1 245057256 245057262 ETS1 JASPAR yes 118498734
chr1 245057256 245057262 SPI1 JASPAR yes 118498735
chr1 245057292 245057298 HiNF-A TRANSFAC yes 36749896
chr1 245057292 245057298 HiNF-A TRANSFAC yes 118498736
chr1 245057293 245057308 NFYB JASPAR yes 36749897
chr1 245057293 245057308 NFYB JASPAR yes 118498737
chr1 245057295 245057311 NFYA JASPAR yes 36749898
chr1 245057295 245057311 NFYA JASPAR yes 118498738
chr1 245057300 245057304 H1TF2 TRANSFAC yes 36749899
chr1 245057300 245057304 NFE TRANSFAC yes 36749900
chr1 245057300 245057304 SRF TRANSFAC yes 36749901
chr1 245057300 245057304 H1TF2 TRANSFAC yes 118498739
chr1 245057300 245057304 NFE TRANSFAC yes 118498740
chr1 245057300 245057304 SRF TRANSFAC yes 118498741
chr1 245057300 245057306 NFYC TRANSFAC yes 36749902
chr1 245057300 245057306 NFYC TRANSFAC yes 118498742
chr1 245057308 245057314 GATA3 JASPAR yes 36749903
chr1 245057308 245057314 GATA3 JASPAR yes 118498743
chr1 245057325 245057340 FOXA1 JASPAR yes 36749904
chr1 245057325 245057340 FOXA1 JASPAR yes 118498744
chr1 245057326 245057338 FOXI1 JASPAR yes 36749905
chr1 245057326 245057338 FOXI1 JASPAR yes 118498745
chr1 245057327 245057341 FOXF2 JASPAR yes 36749906
chr1 245057327 245057341 FOXF2 JASPAR yes 118498746
chr1 245057328 245057339 FOXC1 JASPAR yes 36749907
chr1 245057328 245057339 FOXC1 JASPAR yes 118498747
chr1 245057329 245057333 YY1 TRANSFAC yes 36749908
chr1 245057329 245057333 YY1 TRANSFAC yes 118498748
chr1 245057329 245057340 FOXA1 JASPAR yes 36749909
chr1 245057329 245057340 FOXA1 JASPAR yes 118498749
chr1 245057329 245057344 MEF2A JASPAR yes 36749910
chr1 245057329 245057344 MEF2A JASPAR yes 118498750
chr1 245057330 245057345 MEF2C JASPAR yes 36749911
chr1 245057330 245057345 MEF2C JASPAR yes 118498751
chr1 245057331 245057343 MEF2A JASPAR yes 36749912
chr1 245057331 245057343 MEF2D JASPAR yes 36749913
chr1 245057331 245057343 MEF2A JASPAR yes 118498752
chr1 245057331 245057343 MEF2D JASPAR yes 118498753
chr1 245057333 245057337 YY1 TRANSFAC yes 36749914
chr1 245057333 245057337 YY1 TRANSFAC yes 118498754
chr1 245057355 245057359 NFE TRANSFAC yes 36749915
chr1 245057355 245057359 NFE TRANSFAC yes 118498755
chr1 245057391 245057402 STAT3 JASPAR yes 36749916
chr1 245057391 245057402 STAT3 JASPAR yes 118498756
chr1 245057427 245057448 ZNF263 JASPAR yes 36749917
chr1 245057427 245057448 ZNF263 JASPAR yes 118498757
chr1 245057481 245057502 IRF1 JASPAR yes 36749918
chr1 245057481 245057502 IRF1 JASPAR yes 118498758
chr1 245057485 245057489 YY1 TRANSFAC yes 36749919
chr1 245057485 245057489 YY1 TRANSFAC yes 118498759
chr1 245057485 245057506 IRF1 JASPAR yes 36749920
chr1 245057485 245057506 IRF1 JASPAR yes 118498760
chr1 245057486 245057501 FOXP1 JASPAR yes 36749921
chr1 245057486 245057501 FOXP1 JASPAR yes 118498761
chr1 245057486 245057507 IRF1 JASPAR yes 36749922
chr1 245057486 245057507 IRF1 JASPAR yes 118498762
chr1 245057487 245057502 FOXP1 JASPAR yes 36749923
chr1 245057487 245057502 FOXP1 JASPAR yes 118498763
chr1 245057487 245057508 IRF1 JASPAR yes 36749924
chr1 245057487 245057508 IRF1 JASPAR yes 118498764
chr1 245057492 245057507 FOXP1 JASPAR yes 36749925
chr1 245057492 245057507 FOXP1 JASPAR yes 118498765
chr1 245057495 245057510 FOXP1 JASPAR yes 36749926
chr1 245057495 245057510 FOXP1 JASPAR yes 118498766
chr1 245057502 245057506 YY1 TRANSFAC yes 36749927
chr1 245057502 245057506 YY1 TRANSFAC yes 118498767
SNP sites on vista5906[chr1:245057262-245057513]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 245057273 rs75725039 T C no 1091777
chr1 245057342 rs578118803 G C
MEF2A MEF2C MEF2D
1091778
chr1 245057374 rs145756699 C T no 1091779
chr1 245057384 rs148964180 C T no 1091780
chr1 245057469 rs12565221 A G no 1091781
chr1 245057491 rs192067761 T C
FOXP1 IRF1
1091782
Genes possibly regulated by vista5906[chr1:245057262-245057513]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244998624 245008359 + COX20 ENSG00000203667.5 244998624 0.7 0.99 2008 41362
chr1 245014468 245027844 - HNRNPU ENSG00000153187.12 245027844 0.72 0.98 2009 70582
chr1 245132652 245134390 - RP11-156E8.1 ENSG00000272195.1 245134390 0.76 1.0 2010 23123
chr1 245133007 245290466 + EFCAB2 ENSG00000203666.8 245133007 0.81 0.99 2011 24506
Expression level of Genes
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miRNAs possibly regulated by vista5906[chr1:245057262-245057513]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results