EnhancerDB
  1. Home
  2. Enhancers
  3. vista5907[chr1:245080504-245080636]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5907[chr1:245080504-245080636]
Back to top
Tissue distribution of vista5907
Back to top
Transcription factor that possibly regulate vista5907[chr1:245080504-245080636]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 245080499 245080508 SRY JASPAR yes 36751613
chr1 245080499 245080508 SRY JASPAR yes 118498768
chr1 245080506 245080527 MAFG JASPAR yes 36751614
chr1 245080506 245080527 MAFG JASPAR yes 118498769
chr1 245080518 245080533 NR2C2 JASPAR yes 36751615
chr1 245080518 245080533 NR2C2 JASPAR yes 118498770
chr1 245080542 245080546 H4TF2 TRANSFAC yes 36751616
chr1 245080542 245080546 H4TF2 TRANSFAC yes 118498771
chr1 245080555 245080570 JUND JASPAR yes 36751617
chr1 245080555 245080570 JUND JASPAR yes 118498772
chr1 245080556 245080569 JUN JASPAR yes 36751618
chr1 245080556 245080569 JUN JASPAR yes 118498773
chr1 245080557 245080564 JUN TRANSFAC yes 36751619
chr1 245080557 245080564 JUN TRANSFAC yes 118498774
chr1 245080565 245080569 YY1 TRANSFAC yes 36751620
chr1 245080565 245080569 YY1 TRANSFAC yes 118498775
chr1 245080565 245080575 HOXC10 JASPAR yes 36751621
chr1 245080565 245080575 HOXD11 JASPAR yes 36751622
chr1 245080565 245080575 HOXC10 JASPAR yes 118498776
chr1 245080565 245080575 HOXD11 JASPAR yes 118498777
chr1 245080565 245080576 HOXA10 JASPAR yes 36751623
chr1 245080565 245080576 HOXC11 JASPAR yes 36751624
chr1 245080565 245080576 HOXA10 JASPAR yes 118498778
chr1 245080565 245080576 HOXC11 JASPAR yes 118498779
chr1 245080566 245080575 CDX1 JASPAR yes 36751625
chr1 245080566 245080575 CDX1 JASPAR yes 118498780
chr1 245080566 245080577 CDX2 JASPAR yes 36751626
chr1 245080566 245080577 CDX2 JASPAR yes 118498781
chr1 245080589 245080595 TCF4 TRANSFAC yes 36751627
chr1 245080589 245080595 TCF4 TRANSFAC yes 118498782
chr1 245080596 245080600 LFA1 TRANSFAC yes 36751628
chr1 245080596 245080600 LFA1 TRANSFAC yes 118498783
chr1 245080600 245080621 REST JASPAR yes 36751629
chr1 245080600 245080621 REST JASPAR yes 118498784
chr1 245080621 245080635 CREB3 JASPAR yes 36751630
chr1 245080621 245080635 CREB3 JASPAR yes 118498785
chr1 245080622 245080632 MAX JASPAR yes 36751631
chr1 245080622 245080632 MAX JASPAR yes 118498786
chr1 245080622 245080633 USF1 JASPAR yes 36751632
chr1 245080622 245080633 USF1 JASPAR yes 118498787
chr1 245080623 245080633 BHLHE40 JASPAR yes 36751633
chr1 245080623 245080633 BHLHE41 JASPAR yes 36751634
chr1 245080623 245080633 MAX JASPAR yes 36751635
chr1 245080623 245080633 MLXIPL JASPAR yes 36751636
chr1 245080623 245080633 MLX JASPAR yes 36751637
chr1 245080623 245080633 MNT JASPAR yes 36751638
chr1 245080623 245080633 SREBF2 JASPAR yes 36751639
chr1 245080623 245080633 TFE3 JASPAR yes 36751640
chr1 245080623 245080633 TFEB JASPAR yes 36751641
chr1 245080623 245080633 TFEC JASPAR yes 36751642
chr1 245080623 245080633 BHLHE40 JASPAR yes 118498788
chr1 245080623 245080633 BHLHE41 JASPAR yes 118498789
chr1 245080623 245080633 MAX JASPAR yes 118498790
chr1 245080623 245080633 MLXIPL JASPAR yes 118498791
chr1 245080623 245080633 MLX JASPAR yes 118498792
chr1 245080623 245080633 MNT JASPAR yes 118498793
chr1 245080623 245080633 SREBF2 JASPAR yes 118498794
chr1 245080623 245080633 TFE3 JASPAR yes 118498795
chr1 245080623 245080633 TFEB JASPAR yes 118498796
chr1 245080623 245080633 TFEC JASPAR yes 118498797
chr1 245080623 245080634 USF1 JASPAR yes 36751643
chr1 245080623 245080634 USF2 JASPAR yes 36751644
chr1 245080623 245080634 USF1 JASPAR yes 118498798
chr1 245080623 245080634 USF2 JASPAR yes 118498799
chr1 245080624 245080634 MAX JASPAR yes 36751645
chr1 245080624 245080634 MAX JASPAR yes 118498800
chr1 245080625 245080630 MYC TRANSFAC yes 36751646
chr1 245080625 245080630 USF1 TRANSFAC yes 36751647
chr1 245080625 245080630 USF2 TRANSFAC yes 36751648
chr1 245080625 245080630 MYC TRANSFAC yes 118498801
chr1 245080625 245080630 USF1 TRANSFAC yes 118498802
chr1 245080625 245080630 USF2 TRANSFAC yes 118498803
chr1 245080628 245080648 ESR1 JASPAR yes 36751649
chr1 245080628 245080648 ESR1 JASPAR yes 118498804
SNP sites on vista5907[chr1:245080504-245080636]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 245080511 rs72769484 T C
MAFG
1091921
chr1 245080534 rs141329871 C T no 1091922
chr1 245080577 rs3820132 T C
CDX2
1091923
chr1 245080583 rs116238366 G T no 1091924
Genes possibly regulated by vista5907[chr1:245080504-245080636]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244998624 245008359 + COX20 ENSG00000203667.5 244998624 0.7 0.99 2008 18120
chr1 245014468 245027844 - HNRNPU ENSG00000153187.12 245027844 0.72 0.98 2009 47340
chr1 245132652 245134390 - RP11-156E8.1 ENSG00000272195.1 245134390 0.76 1.0 2010 46246
chr1 245133007 245290466 + EFCAB2 ENSG00000203666.8 245133007 0.81 0.99 2011 47629
Expression level of Genes
Back to top
miRNAs possibly regulated by vista5907[chr1:245080504-245080636]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results