EnhancerDB
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  3. vista5908[chr1:245082176-245082355]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5908[chr1:245082176-245082355]
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Tissue distribution of vista5908
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Transcription factor that possibly regulate vista5908[chr1:245082176-245082355]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 245081845 245082471 MAX UCSC Txn Factor no Conserved 107888725
chr1 245081877 245082424 E2F6 UCSC Txn Factor no Conserved 107888728
chr1 245081888 245082554 MYC UCSC Txn Factor no Conserved 107888729
chr1 245082084 245082423 BHLHE40 UCSC Txn Factor no Conserved 107888764
chr1 245082102 245082405 EGR1 UCSC Txn Factor no Conserved 107888769
chr1 245082180 245082191 NRF1 JASPAR yes 36751874
chr1 245082180 245082191 NRF1 JASPAR yes 118498805
chr1 245082181 245082192 NRF1 JASPAR yes 36751875
chr1 245082181 245082192 NRF1 JASPAR yes 118498806
chr1 245082186 245082197 NRF1 JASPAR yes 36751876
chr1 245082186 245082197 NRF1 JASPAR yes 118498807
chr1 245082203 245082221 ESR1 JASPAR yes 36751877
chr1 245082203 245082221 ESR1 JASPAR yes 118498808
chr1 245082224 245082238 CREB3L1 JASPAR yes 36751878
chr1 245082224 245082238 CREB3L1 JASPAR yes 118498809
chr1 245082225 245082237 HES5 JASPAR yes 36751879
chr1 245082225 245082237 HES7 JASPAR yes 36751880
chr1 245082225 245082237 HES5 JASPAR yes 118498810
chr1 245082225 245082237 HES7 JASPAR yes 118498811
chr1 245082226 245082236 HEY1 JASPAR yes 36751881
chr1 245082226 245082236 HEY2 JASPAR yes 36751882
chr1 245082226 245082236 MAX JASPAR yes 36751883
chr1 245082226 245082236 MNT JASPAR yes 36751884
chr1 245082226 245082236 HEY1 JASPAR yes 118498812
chr1 245082226 245082236 HEY2 JASPAR yes 118498813
chr1 245082226 245082236 MAX JASPAR yes 118498814
chr1 245082226 245082236 MNT JASPAR yes 118498815
chr1 245082227 245082234 USF1 JASPAR yes 36751885
chr1 245082227 245082234 USF1 JASPAR yes 118498816
chr1 245082227 245082239 HINFP JASPAR yes 36751886
chr1 245082227 245082239 HINFP JASPAR yes 118498817
chr1 245082228 245082233 MYC TRANSFAC yes 36751887
chr1 245082228 245082233 USF1 TRANSFAC yes 36751888
chr1 245082228 245082233 USF2 TRANSFAC yes 36751889
chr1 245082228 245082233 MYC TRANSFAC yes 118498818
chr1 245082228 245082233 USF1 TRANSFAC yes 118498819
chr1 245082228 245082233 USF2 TRANSFAC yes 118498820
chr1 245082234 245082245 NRF1 JASPAR yes 36751890
chr1 245082234 245082245 NRF1 JASPAR yes 118498821
chr1 245082262 245082274 GLI2 JASPAR yes 36751891
chr1 245082262 245082274 GLI2 JASPAR yes 118498822
chr1 245082331 245082335 NFE TRANSFAC yes 36751892
chr1 245082331 245082335 NFE TRANSFAC yes 118498823
chr1 245082332 245082344 PKNOX1 JASPAR yes 36751893
chr1 245082332 245082344 PKNOX2 JASPAR yes 36751894
chr1 245082332 245082344 TGIF1 JASPAR yes 36751895
chr1 245082332 245082344 TGIF2 JASPAR yes 36751896
chr1 245082332 245082344 PKNOX1 JASPAR yes 118498824
chr1 245082332 245082344 PKNOX2 JASPAR yes 118498825
chr1 245082332 245082344 TGIF1 JASPAR yes 118498826
chr1 245082332 245082344 TGIF2 JASPAR yes 118498827
chr1 245082352 245082356 NFE TRANSFAC yes 36751897
chr1 245082352 245082356 NFE TRANSFAC yes 118498828
SNP sites on vista5908[chr1:245082176-245082355]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 245082204 rs118186142 G C
BHLHE40 E2F6 EGR1 ESR1 MAX MYC
1091943
chr1 245082220 rs546722842 A G,T
BHLHE40 E2F6 EGR1 ESR1 MAX MYC
1091944
chr1 245082225 rs114634742 G A
BHLHE40 CREB3L1 E2F6 EGR1 HES5 HES7 MAX MYC
1091945
chr1 245082241 rs538306465 G A
BHLHE40 E2F6 EGR1 MAX MYC NRF1
1091946
chr1 245082260 rs143137005 G A,C
BHLHE40 E2F6 EGR1 MAX MYC
1091947
chr1 245082290 rs9659459 G A
BHLHE40 E2F6 EGR1 MAX MYC
1091948
chr1 245082300 rs117168172 A C
BHLHE40 E2F6 EGR1 MAX MYC
1091949
chr1 245082315 rs542650881 C A
BHLHE40 E2F6 EGR1 MAX MYC
1091950
chr1 245082335 rs553353398 T C
BHLHE40 E2F6 EGR1 MAX MYC NFE PKNOX1 PKNOX2 TGIF1 TGIF2
1091951
Genes possibly regulated by vista5908[chr1:245082176-245082355]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 244998624 245008359 + COX20 ENSG00000203667.5 244998624 0.7 0.99 2008 16448
chr1 245014468 245027844 - HNRNPU ENSG00000153187.12 245027844 0.72 0.98 2009 45668
chr1 245132652 245134390 - RP11-156E8.1 ENSG00000272195.1 245134390 0.76 1.0 2010 47965
chr1 245133007 245290466 + EFCAB2 ENSG00000203666.8 245133007 0.81 0.99 2011 49348
Expression level of Genes
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miRNAs possibly regulated by vista5908[chr1:245082176-245082355]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results