EnhancerDB
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  3. vista5923[chr1:245971113-245971386]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista5923[chr1:245971113-245971386]
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Tissue distribution of vista5923
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Transcription factor that possibly regulate vista5923[chr1:245971113-245971386]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 245971109 245971124 FOXP1 JASPAR yes 36799078
chr1 245971109 245971124 FOXP1 JASPAR yes 118499428
chr1 245971113 245971128 FOXP1 JASPAR yes 36799079
chr1 245971113 245971128 FOXP1 JASPAR yes 118499429
chr1 245971113 245971134 IRF1 JASPAR yes 36799080
chr1 245971113 245971134 IRF1 JASPAR yes 118499430
chr1 245971114 245971129 FOXP1 JASPAR yes 36799081
chr1 245971114 245971129 FOXP1 JASPAR yes 118499431
chr1 245971114 245971135 IRF1 JASPAR yes 36799082
chr1 245971114 245971135 IRF1 JASPAR yes 118499432
chr1 245971115 245971130 FOXP1 JASPAR yes 36799083
chr1 245971115 245971130 FOXP1 JASPAR yes 118499433
chr1 245971117 245971132 FOXP1 JASPAR yes 36799084
chr1 245971117 245971132 FOXP1 JASPAR yes 118499434
chr1 245971118 245971133 STAT2 JASPAR yes 36799085
chr1 245971118 245971133 STAT2 JASPAR yes 118499435
chr1 245971119 245971134 FOXP1 JASPAR yes 36799086
chr1 245971119 245971134 FOXP1 JASPAR yes 118499436
chr1 245971119 245971140 IRF1 JASPAR yes 36799087
chr1 245971119 245971140 IRF1 JASPAR yes 118499437
chr1 245971120 245971141 IRF1 JASPAR yes 36799088
chr1 245971120 245971141 IRF1 JASPAR yes 118499438
chr1 245971121 245971133 FOXC2 JASPAR yes 36799089
chr1 245971121 245971133 FOXC2 JASPAR yes 118499439
chr1 245971121 245971141 RREB1 JASPAR yes 36799090
chr1 245971121 245971141 RREB1 JASPAR yes 118499440
chr1 245971122 245971133 FOXP2 JASPAR yes 36799091
chr1 245971122 245971133 FOXP2 JASPAR yes 118499441
chr1 245971126 245971141 FOXP1 JASPAR yes 36799092
chr1 245971126 245971141 FOXP1 JASPAR yes 118499442
chr1 245971126 245971146 RREB1 JASPAR yes 36799093
chr1 245971126 245971146 RREB1 JASPAR yes 118499443
chr1 245971126 245971147 IRF1 JASPAR yes 36799094
chr1 245971126 245971147 IRF1 JASPAR yes 118499444
chr1 245971128 245971148 RREB1 JASPAR yes 36799095
chr1 245971128 245971148 RREB1 JASPAR yes 118499445
chr1 245971133 245971153 RREB1 JASPAR yes 36799096
chr1 245971133 245971153 RREB1 JASPAR yes 118499446
chr1 245971134 245971149 FOXP1 JASPAR yes 36799097
chr1 245971134 245971149 FOXP1 JASPAR yes 118499447
chr1 245971134 245971155 IRF1 JASPAR yes 36799098
chr1 245971134 245971155 IRF1 JASPAR yes 118499448
chr1 245971137 245971148 FOXP2 JASPAR yes 36799099
chr1 245971137 245971148 FOXP2 JASPAR yes 118499449
chr1 245971138 245971152 SPI1 JASPAR yes 36799100
chr1 245971138 245971152 SPI1 JASPAR yes 118499450
chr1 245971157 245971162 MYC TRANSFAC yes 36799101
chr1 245971157 245971162 MYC TRANSFAC yes 118499451
chr1 245971166 245971177 PHOX2A JASPAR yes 36799102
chr1 245971166 245971177 PROP1 JASPAR yes 36799103
chr1 245971166 245971177 PHOX2A JASPAR yes 118499452
chr1 245971166 245971177 PROP1 JASPAR yes 118499453
chr1 245971168 245971178 HOXD13 JASPAR yes 36799104
chr1 245971168 245971178 HOXD13 JASPAR yes 118499454
chr1 245971168 245971179 HOXA10 JASPAR yes 36799105
chr1 245971168 245971179 HOXA10 JASPAR yes 118499455
chr1 245971169 245971179 ALX3 JASPAR yes 36799106
chr1 245971169 245971179 GSX2 JASPAR yes 36799107
chr1 245971169 245971179 MNX1 JASPAR yes 36799108
chr1 245971169 245971179 ALX3 JASPAR yes 118499456
chr1 245971169 245971179 GSX2 JASPAR yes 118499457
chr1 245971169 245971179 MNX1 JASPAR yes 118499458
chr1 245971170 245971178 BARX1 JASPAR yes 36799109
chr1 245971170 245971178 BSX JASPAR yes 36799110
chr1 245971170 245971178 ISL2 JASPAR yes 36799111
chr1 245971170 245971178 LMX1B JASPAR yes 36799112
chr1 245971170 245971178 MSX1 JASPAR yes 36799113
chr1 245971170 245971178 MSX2 JASPAR yes 36799114
chr1 245971170 245971178 BARX1 JASPAR yes 118499459
chr1 245971170 245971178 BSX JASPAR yes 118499460
chr1 245971170 245971178 ISL2 JASPAR yes 118499461
chr1 245971170 245971178 LMX1B JASPAR yes 118499462
chr1 245971170 245971178 MSX1 JASPAR yes 118499463
chr1 245971170 245971178 MSX2 JASPAR yes 118499464
chr1 245971179 245971190 HOXA10 JASPAR yes 36799115
chr1 245971179 245971190 HOXA10 JASPAR yes 118499465
chr1 245971180 245971190 ALX3 JASPAR yes 36799116
chr1 245971180 245971190 EMX1 JASPAR yes 36799117
chr1 245971180 245971190 EMX2 JASPAR yes 36799118
chr1 245971180 245971190 EVX2 JASPAR yes 36799119
chr1 245971180 245971190 GSX2 JASPAR yes 36799120
chr1 245971180 245971190 HOXB2 JASPAR yes 36799121
chr1 245971180 245971190 HOXB3 JASPAR yes 36799122
chr1 245971180 245971190 MEOX1 JASPAR yes 36799123
chr1 245971180 245971190 MEOX2 JASPAR yes 36799124
chr1 245971180 245971190 MIXL1 JASPAR yes 36799125
chr1 245971180 245971190 MNX1 JASPAR yes 36799126
chr1 245971180 245971190 RAX JASPAR yes 36799127
chr1 245971180 245971190 ALX3 JASPAR yes 118499466
chr1 245971180 245971190 EMX1 JASPAR yes 118499467
chr1 245971180 245971190 EMX2 JASPAR yes 118499468
chr1 245971180 245971190 EVX2 JASPAR yes 118499469
chr1 245971180 245971190 GSX2 JASPAR yes 118499470
chr1 245971180 245971190 HOXB2 JASPAR yes 118499471
chr1 245971180 245971190 HOXB3 JASPAR yes 118499472
chr1 245971180 245971190 MEOX1 JASPAR yes 118499473
chr1 245971180 245971190 MEOX2 JASPAR yes 118499474
chr1 245971180 245971190 MIXL1 JASPAR yes 118499475
chr1 245971180 245971190 MNX1 JASPAR yes 118499476
chr1 245971180 245971190 RAX JASPAR yes 118499477
chr1 245971181 245971189 LMX1A JASPAR yes 36799128
chr1 245971181 245971189 LMX1B JASPAR yes 36799129
chr1 245971181 245971189 NKX6-1 JASPAR yes 36799130
chr1 245971181 245971189 NKX6-2 JASPAR yes 36799131
chr1 245971181 245971189 PDX1 JASPAR yes 36799132
chr1 245971181 245971189 VAX1 JASPAR yes 36799133
chr1 245971181 245971189 VAX2 JASPAR yes 36799134
chr1 245971181 245971189 VSX1 JASPAR yes 36799135
chr1 245971181 245971189 LMX1A JASPAR yes 118499478
chr1 245971181 245971189 LMX1B JASPAR yes 118499479
chr1 245971181 245971189 NKX6-1 JASPAR yes 118499480
chr1 245971181 245971189 NKX6-2 JASPAR yes 118499481
chr1 245971181 245971189 PDX1 JASPAR yes 118499482
chr1 245971181 245971189 VAX1 JASPAR yes 118499483
chr1 245971181 245971189 VAX2 JASPAR yes 118499484
chr1 245971181 245971189 VSX1 JASPAR yes 118499485
chr1 245971211 245971227 E2F2 JASPAR yes 36799136
chr1 245971211 245971227 E2F2 JASPAR yes 118499486
chr1 245971215 245971233 IRF2 JASPAR yes 36799137
chr1 245971215 245971233 IRF2 JASPAR yes 118499487
chr1 245971221 245971236 HNF1A JASPAR yes 36799138
chr1 245971221 245971236 HNF1A JASPAR yes 118499488
chr1 245971222 245971235 HNF1B JASPAR yes 36799139
chr1 245971222 245971235 HNF1B JASPAR yes 118499489
chr1 245971222 245971236 POU4F1 JASPAR yes 36799140
chr1 245971222 245971236 POU4F1 JASPAR yes 118499490
chr1 245971222 245971238 POU4F3 JASPAR yes 36799141
chr1 245971222 245971238 POU4F3 JASPAR yes 118499491
chr1 245971223 245971235 HNF1B JASPAR yes 36799142
chr1 245971223 245971235 HNF1B JASPAR yes 118499492
chr1 245971227 245971237 HOXA13 JASPAR yes 36799143
chr1 245971227 245971237 HOXA13 JASPAR yes 118499493
chr1 245971269 245971282 DUXA JASPAR yes 36799144
chr1 245971269 245971282 DUXA JASPAR yes 118499494
chr1 245971270 245971281 DUX4 JASPAR yes 36799145
chr1 245971270 245971281 PHOX2A JASPAR yes 36799146
chr1 245971270 245971281 PROP1 JASPAR yes 36799147
chr1 245971270 245971281 DUX4 JASPAR yes 118499495
chr1 245971270 245971281 PHOX2A JASPAR yes 118499496
chr1 245971270 245971281 PROP1 JASPAR yes 118499497
chr1 245971278 245971289 EBF1 JASPAR yes 36799148
chr1 245971278 245971289 EBF1 JASPAR yes 118499498
chr1 245971308 245971314 NFIC JASPAR yes 36799149
chr1 245971308 245971314 NFIC JASPAR yes 118499499
chr1 245971318 245971331 JUN JASPAR yes 36799150
chr1 245971318 245971331 JUN JASPAR yes 118499500
chr1 245971365 245971386 REST JASPAR yes 36799151
chr1 245971365 245971386 REST JASPAR yes 118499501
chr1 245971366 245971385 REST JASPAR yes 36799152
chr1 245971366 245971385 REST JASPAR yes 118499502
chr1 245971369 245971372 MYB TRANSFAC yes 36799153
chr1 245971369 245971372 MYB TRANSFAC yes 118499503
SNP sites on vista5923[chr1:245971113-245971386]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 245971123 rs377536031 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
1097595
chr1 245971124 rs192412152 A C
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2
1097596
chr1 245971161 rs73134723 C T
MYC
1097597
chr1 245971162 rs147319544 G A
MYC
1097598
chr1 245971183 rs140021735 T C
ALX3 EMX1 EMX2 EVX2 GSX2 HOXA10 HOXB2 HOXB3 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 PDX1 RAX VAX1 VAX2 VSX1
1097599
chr1 245971301 rs74891666 T C no 1097600
chr1 245971308 rs185746940 C G
NFIC
1097601
chr1 245971331 rs146217578 G GA
JUN
1097602
Genes possibly regulated by vista5923[chr1:245971113-245971386]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista5923[chr1:245971113-245971386]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results