EnhancerDB
  1. Home
  2. Enhancers
  3. vista600[chr1:19280139-19280583]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista600[chr1:19280139-19280583]
Back to top
Tissue distribution of vista600
Back to top
Transcription factor that possibly regulate vista600[chr1:19280139-19280583]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19280136 19280147 NFE2 JASPAR yes 27165632
chr1 19280136 19280147 NFE2 JASPAR yes 118242834
chr1 19280150 19280153 MYB TRANSFAC yes 27165633
chr1 19280150 19280153 MYB TRANSFAC yes 118242835
chr1 19280179 19280193 MTF1 JASPAR yes 27165634
chr1 19280179 19280193 MTF1 JASPAR yes 118242836
chr1 19280196 19280202 SP1 TRANSFAC yes 27165635
chr1 19280196 19280202 SP1 TRANSFAC yes 118242837
chr1 19280196 19280207 E2F1 JASPAR yes 27165636
chr1 19280196 19280207 E2F1 JASPAR yes 118242838
chr1 19280197 19280202 SP1 TRANSFAC yes 27165637
chr1 19280197 19280202 SP1 TRANSFAC yes 118242839
chr1 19280197 19280208 E2F4 JASPAR yes 27165638
chr1 19280197 19280208 E2F6 JASPAR yes 27165639
chr1 19280197 19280208 E2F4 JASPAR yes 118242840
chr1 19280197 19280208 E2F6 JASPAR yes 118242841
chr1 19280198 19280203 SP1 TRANSFAC yes 27165640
chr1 19280198 19280203 SP1 TRANSFAC yes 118242842
chr1 19280201 19280206 ETS2 TRANSFAC yes 27165641
chr1 19280201 19280206 ETS2 TRANSFAC yes 118242843
chr1 19280211 19280216 SP1 TRANSFAC yes 27165642
chr1 19280211 19280216 SP1 TRANSFAC yes 118242844
chr1 19280221 19280231 FIGLA JASPAR yes 27165643
chr1 19280221 19280231 ID4 JASPAR yes 27165644
chr1 19280221 19280231 FIGLA JASPAR yes 118242845
chr1 19280221 19280231 ID4 JASPAR yes 118242846
chr1 19280222 19280231 SNAI2 JASPAR yes 27165645
chr1 19280222 19280231 SNAI2 JASPAR yes 118242847
chr1 19280223 19280228 USF2 TRANSFAC yes 27165646
chr1 19280223 19280228 USF2 TRANSFAC yes 118242848
chr1 19280225 19280243 MAFF JASPAR yes 27165647
chr1 19280225 19280243 MAFF JASPAR yes 118242849
chr1 19280226 19280230 NFE TRANSFAC yes 27165648
chr1 19280226 19280230 NFE TRANSFAC yes 118242850
chr1 19280226 19280241 MAFK JASPAR yes 27165649
chr1 19280226 19280241 MAFK JASPAR yes 118242851
chr1 19280238 19280243 MYC TRANSFAC yes 27165650
chr1 19280238 19280243 MYC TRANSFAC yes 118242852
chr1 19280267 19280279 JDP2 JASPAR yes 27165651
chr1 19280267 19280279 JDP2 JASPAR yes 118242853
chr1 19280267 19280282 JUND JASPAR yes 27165652
chr1 19280267 19280282 JUND JASPAR yes 118242854
chr1 19280268 19280281 JUN JASPAR yes 27165653
chr1 19280268 19280281 JUN JASPAR yes 118242855
chr1 19280269 19280276 JUN TRANSFAC yes 27165654
chr1 19280269 19280276 JUN TRANSFAC yes 118242856
chr1 19280270 19280283 EOMES JASPAR yes 27165655
chr1 19280270 19280283 EOMES JASPAR yes 118242857
chr1 19280272 19280283 TBX20 JASPAR yes 27165656
chr1 19280272 19280283 TBX20 JASPAR yes 118242858
chr1 19280273 19280283 TBX21 JASPAR yes 27165657
chr1 19280273 19280283 TBX21 JASPAR yes 118242859
chr1 19280274 19280282 MGA JASPAR yes 27165658
chr1 19280274 19280282 TBX15 JASPAR yes 27165659
chr1 19280274 19280282 TBX1 JASPAR yes 27165660
chr1 19280274 19280282 TBX4 JASPAR yes 27165661
chr1 19280274 19280282 TBX5 JASPAR yes 27165662
chr1 19280274 19280282 MGA JASPAR yes 118242860
chr1 19280274 19280282 TBX15 JASPAR yes 118242861
chr1 19280274 19280282 TBX1 JASPAR yes 118242862
chr1 19280274 19280282 TBX4 JASPAR yes 118242863
chr1 19280274 19280282 TBX5 JASPAR yes 118242864
chr1 19280283 19280288 SP1 TRANSFAC yes 27165663
chr1 19280283 19280288 SP1 TRANSFAC yes 118242865
chr1 19280310 19280320 CEBPG JASPAR yes 27165664
chr1 19280310 19280320 CEBPG JASPAR yes 118242866
chr1 19280311 19280325 TLX1 JASPAR yes 27165665
chr1 19280311 19280325 TLX1 JASPAR yes 118242867
chr1 19280318 19280327 HIC2 JASPAR yes 27165666
chr1 19280318 19280327 HIC2 JASPAR yes 118242868
chr1 19280319 19280325 NFIC JASPAR yes 27165667
chr1 19280319 19280325 NFIC JASPAR yes 118242869
chr1 19280328 19280339 E2F6 JASPAR yes 27165668
chr1 19280328 19280339 E2F6 JASPAR yes 118242870
chr1 19280341 19280350 HIC2 JASPAR yes 27165669
chr1 19280341 19280350 HIC2 JASPAR yes 118242871
chr1 19280344 19280348 LFA1 TRANSFAC yes 27165670
chr1 19280344 19280348 LFA1 TRANSFAC yes 118242872
chr1 19280349 19280359 REL JASPAR yes 27165671
chr1 19280349 19280359 REL JASPAR yes 118242873
chr1 19280352 19280362 NFATC3 JASPAR yes 27165672
chr1 19280352 19280362 NFATC3 JASPAR yes 118242874
chr1 19280353 19280360 NFATC2 JASPAR yes 27165673
chr1 19280353 19280360 NFATC2 JASPAR yes 118242875
chr1 19280375 19280379 H4TF2 TRANSFAC yes 27165674
chr1 19280375 19280379 H4TF2 TRANSFAC yes 118242876
chr1 19280389 19280409 RREB1 JASPAR yes 27165675
chr1 19280389 19280409 RREB1 JASPAR yes 118242877
chr1 19280392 19280403 HOXA10 JASPAR yes 27165676
chr1 19280392 19280403 HOXA10 JASPAR yes 118242878
chr1 19280393 19280402 CDX1 JASPAR yes 27165677
chr1 19280393 19280402 CDX1 JASPAR yes 118242879
chr1 19280393 19280403 HOXA13 JASPAR yes 27165678
chr1 19280393 19280403 HOXB13 JASPAR yes 27165679
chr1 19280393 19280403 HOXD13 JASPAR yes 27165680
chr1 19280393 19280403 HOXA13 JASPAR yes 118242880
chr1 19280393 19280403 HOXB13 JASPAR yes 118242881
chr1 19280393 19280403 HOXD13 JASPAR yes 118242882
chr1 19280394 19280414 RREB1 JASPAR yes 27165681
chr1 19280394 19280414 RREB1 JASPAR yes 118242883
chr1 19280396 19280411 FOXP1 JASPAR yes 27165682
chr1 19280396 19280411 FOXP1 JASPAR yes 118242884
chr1 19280397 19280408 FOXA1 JASPAR yes 27165683
chr1 19280397 19280408 FOXA1 JASPAR yes 118242885
chr1 19280398 19280418 RREB1 JASPAR yes 27165684
chr1 19280398 19280418 RREB1 JASPAR yes 118242886
chr1 19280399 19280411 FOXI1 JASPAR yes 27165685
chr1 19280399 19280411 FOXI1 JASPAR yes 118242887
chr1 19280400 19280420 RREB1 JASPAR yes 27165686
chr1 19280400 19280420 RREB1 JASPAR yes 118242888
chr1 19280403 19280409 HiNF-A TRANSFAC yes 27165687
chr1 19280403 19280409 HiNF-A TRANSFAC yes 118242889
chr1 19280412 19280427 TFAP2A JASPAR yes 27165688
chr1 19280412 19280427 TFAP2A JASPAR yes 118242890
chr1 19280414 19280429 TFAP2A JASPAR yes 27165689
chr1 19280414 19280429 TFAP2C JASPAR yes 27165690
chr1 19280414 19280429 TFAP2A JASPAR yes 118242891
chr1 19280414 19280429 TFAP2C JASPAR yes 118242892
chr1 19280415 19280426 TFAP2A JASPAR yes 27165691
chr1 19280415 19280426 TFAP2B JASPAR yes 27165692
chr1 19280415 19280426 TFAP2C JASPAR yes 27165693
chr1 19280415 19280426 TFAP2A JASPAR yes 118242893
chr1 19280415 19280426 TFAP2B JASPAR yes 118242894
chr1 19280415 19280426 TFAP2C JASPAR yes 118242895
chr1 19280432 19280443 FOXH1 JASPAR yes 27165694
chr1 19280432 19280443 FOXH1 JASPAR yes 118242896
chr1 19280441 19280454 SMAD2 JASPAR yes 27165695
chr1 19280441 19280454 SMAD2 JASPAR yes 118242897
chr1 19280466 19280477 SP1 TRANSFAC yes 27165696
chr1 19280466 19280477 SP1 TRANSFAC yes 118242898
chr1 19280472 19280478 MZF1 JASPAR yes 27165697
chr1 19280472 19280478 MZF1 JASPAR yes 118242899
chr1 19280472 19280490 IRF2 JASPAR yes 27165698
chr1 19280472 19280490 IRF2 JASPAR yes 118242900
chr1 19280477 19280488 CEBPB JASPAR yes 27165699
chr1 19280477 19280488 CEBPB JASPAR yes 118242901
chr1 19280478 19280489 CEBPA JASPAR yes 27165700
chr1 19280478 19280489 CEBPA JASPAR yes 118242902
chr1 19280514 19280520 NFE2 TRANSFAC yes 27165701
chr1 19280514 19280520 NFE2 TRANSFAC yes 118242903
chr1 19280519 19280523 H1TF2 TRANSFAC yes 27165702
chr1 19280519 19280523 NFE TRANSFAC yes 27165703
chr1 19280519 19280523 SRF TRANSFAC yes 27165704
chr1 19280519 19280523 H1TF2 TRANSFAC yes 118242904
chr1 19280519 19280523 NFE TRANSFAC yes 118242905
chr1 19280519 19280523 SRF TRANSFAC yes 118242906
chr1 19280521 19280532 ESRRB JASPAR yes 27165705
chr1 19280521 19280532 ESRRB JASPAR yes 118242907
chr1 19280539 19280544 SP1 TRANSFAC yes 27165706
chr1 19280539 19280544 SP1 TRANSFAC yes 118242908
chr1 19280561 19280575 TLX1 JASPAR yes 27165707
chr1 19280561 19280575 TLX1 JASPAR yes 118242909
chr1 19280573 19280578 SP1 TRANSFAC yes 27165708
chr1 19280573 19280578 SP1 TRANSFAC yes 118242910
chr1 19280574 19280579 SP1 TRANSFAC yes 27165709
chr1 19280574 19280579 SP1 TRANSFAC yes 118242911
SNP sites on vista600[chr1:19280139-19280583]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19280185 rs560209427 A C
MTF1
128443
chr1 19280190 rs369208359 T A
MTF1
128444
chr1 19280214 rs181166792 G A
SP1
128445
chr1 19280242 rs149596913 C T
MAFF MYC
128446
chr1 19280383 rs6694507 A G no 128447
chr1 19280387 rs74352848 C T no 128448
Genes possibly regulated by vista600[chr1:19280139-19280583]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19166093 19186176 - TAS1R2 ENSG00000179002.5 19186176 0.94 1.0 252 6037
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 67476
chr1 19197926 19229275 - ALDH4A1 ENSG00000159423.12 19229275 0.95 0.98 254 49136
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 97403
Expression level of Genes
Back to top
miRNAs possibly regulated by vista600[chr1:19280139-19280583]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results