EnhancerDB
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  3. vista604[chr1:19333976-19334220]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista604[chr1:19333976-19334220]
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Tissue distribution of vista604
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Transcription factor that possibly regulate vista604[chr1:19333976-19334220]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19334013 19334027 ZIC1 JASPAR yes 27170353
chr1 19334013 19334027 ZIC1 JASPAR yes 118242972
chr1 19334013 19334028 ZIC3 JASPAR yes 27170354
chr1 19334013 19334028 ZIC4 JASPAR yes 27170355
chr1 19334013 19334028 ZIC3 JASPAR yes 118242973
chr1 19334013 19334028 ZIC4 JASPAR yes 118242974
chr1 19334020 19334031 FOXH1 JASPAR yes 27170356
chr1 19334020 19334031 FOXH1 JASPAR yes 118242975
chr1 19334021 19334027 ZNF354C JASPAR yes 27170357
chr1 19334021 19334027 ZNF354C JASPAR yes 118242976
chr1 19334021 19334031 RELA JASPAR yes 27170358
chr1 19334021 19334031 REL JASPAR yes 27170359
chr1 19334021 19334031 RELA JASPAR yes 118242977
chr1 19334021 19334031 REL JASPAR yes 118242978
chr1 19334024 19334029 H4TF1 TRANSFAC yes 27170360
chr1 19334024 19334029 H4TF1 TRANSFAC yes 118242979
chr1 19334033 19334048 PRDM1 JASPAR yes 27170361
chr1 19334033 19334048 PRDM1 JASPAR yes 118242980
chr1 19334059 19334070 STAT1 JASPAR yes 27170362
chr1 19334059 19334070 STAT1 JASPAR yes 118242981
chr1 19334069 19334077 FOXL1 JASPAR yes 27170363
chr1 19334069 19334077 FOXL1 JASPAR yes 118242982
chr1 19334078 19334092 EBF1 JASPAR yes 27170364
chr1 19334078 19334092 EBF1 JASPAR yes 118242983
chr1 19334079 19334090 EBF1 JASPAR yes 27170365
chr1 19334079 19334090 EBF1 JASPAR yes 118242984
chr1 19334080 19334091 EBF1 JASPAR yes 27170366
chr1 19334080 19334091 EBF1 JASPAR yes 118242985
chr1 19334087 19334101 STAT1 JASPAR yes 27170367
chr1 19334087 19334101 STAT1 JASPAR yes 118242986
chr1 19334088 19334102 FOXF2 JASPAR yes 27170368
chr1 19334088 19334102 FOXF2 JASPAR yes 118242987
chr1 19334088 19334103 FOXP1 JASPAR yes 27170369
chr1 19334088 19334103 FOXP1 JASPAR yes 118242988
chr1 19334089 19334100 FOXA1 JASPAR yes 27170370
chr1 19334089 19334100 FOXA1 JASPAR yes 118242989
chr1 19334089 19334104 FOXA1 JASPAR yes 27170371
chr1 19334089 19334104 FOXA1 JASPAR yes 118242990
chr1 19334090 19334102 FOXC2 JASPAR yes 27170372
chr1 19334090 19334102 FOXC2 JASPAR yes 118242991
chr1 19334091 19334102 FOXP2 JASPAR yes 27170373
chr1 19334091 19334102 FOXP2 JASPAR yes 118242992
chr1 19334091 19334103 FOXI1 JASPAR yes 27170374
chr1 19334091 19334103 FOXI1 JASPAR yes 118242993
chr1 19334097 19334111 GATA2 JASPAR yes 27170375
chr1 19334097 19334111 GATA2 JASPAR yes 118242994
chr1 19334099 19334107 GATA3 JASPAR yes 27170376
chr1 19334099 19334107 GATA3 JASPAR yes 118242995
chr1 19334103 19334123 TP63 JASPAR yes 27170377
chr1 19334103 19334123 TP63 JASPAR yes 118242996
chr1 19334104 19334113 SNAI2 JASPAR yes 27170378
chr1 19334104 19334113 SNAI2 JASPAR yes 118242997
chr1 19334104 19334114 TCF3 JASPAR yes 27170379
chr1 19334104 19334114 TCF4 JASPAR yes 27170380
chr1 19334104 19334114 TCF3 JASPAR yes 118242998
chr1 19334104 19334114 TCF4 JASPAR yes 118242999
chr1 19334106 19334115 ZEB1 JASPAR yes 27170381
chr1 19334106 19334115 ZEB1 JASPAR yes 118243000
chr1 19334108 19334113 SP1 TRANSFAC yes 27170382
chr1 19334108 19334113 SP1 TRANSFAC yes 118243001
chr1 19334109 19334122 NR2F1 JASPAR yes 27170383
chr1 19334109 19334122 NR2F1 JASPAR yes 118243002
chr1 19334110 19334125 NR2C2 JASPAR yes 27170384
chr1 19334110 19334125 NR2C2 JASPAR yes 118243003
chr1 19334112 19334133 ZNF263 JASPAR yes 27170385
chr1 19334112 19334133 ZNF263 JASPAR yes 118243004
chr1 19334113 19334117 ESR1 TRANSFAC yes 27170386
chr1 19334113 19334117 ESR1 TRANSFAC yes 118243005
chr1 19334122 19334127 TFAP2A TRANSFAC yes 27170387
chr1 19334122 19334127 TFAP2A TRANSFAC yes 118243006
chr1 19334122 19334128 MZF1 JASPAR yes 27170388
chr1 19334122 19334128 MZF1 JASPAR yes 118243007
chr1 19334130 19334135 ETS2 TRANSFAC yes 27170389
chr1 19334130 19334135 ETS2 TRANSFAC yes 118243008
chr1 19334143 19334150 CEBPA TRANSFAC yes 27170390
chr1 19334143 19334150 CEBPA TRANSFAC yes 118243009
chr1 19334149 19334154 SP1 TRANSFAC yes 27170391
chr1 19334149 19334154 SP1 TRANSFAC yes 118243010
chr1 19334149 19334158 HIC2 JASPAR yes 27170392
chr1 19334149 19334158 HIC2 JASPAR yes 118243011
chr1 19334152 19334156 LFA1 TRANSFAC yes 27170393
chr1 19334152 19334156 LFA1 TRANSFAC yes 118243012
chr1 19334178 19334195 RARA JASPAR yes 27170394
chr1 19334178 19334195 RARA JASPAR yes 118243013
chr1 19334179 19334183 ESR1 TRANSFAC yes 27170395
chr1 19334179 19334183 ESR1 TRANSFAC yes 118243014
chr1 19334187 19334205 ESR1 JASPAR yes 27170396
chr1 19334187 19334205 ESR2 JASPAR yes 27170397
chr1 19334187 19334205 ESR1 JASPAR yes 118243015
chr1 19334187 19334205 ESR2 JASPAR yes 118243016
chr1 19334188 19334194 ESR1 TRANSFAC yes 27170398
chr1 19334188 19334194 ESR1 TRANSFAC yes 118243017
chr1 19334189 19334204 ESR2 JASPAR yes 27170399
chr1 19334189 19334204 ESR2 JASPAR yes 118243018
chr1 19334190 19334194 ESR1 TRANSFAC yes 27170400
chr1 19334190 19334194 ESR1 TRANSFAC yes 118243019
chr1 19334205 19334211 YY1 JASPAR yes 27170401
chr1 19334205 19334211 YY1 JASPAR yes 118243020
chr1 19334206 19334220 GLIS3 JASPAR yes 27170402
chr1 19334206 19334220 GLIS3 JASPAR yes 118243021
chr1 19334215 19334227 TEAD1 JASPAR yes 27170403
chr1 19334215 19334227 TEAD1 JASPAR yes 118243022
SNP sites on vista604[chr1:19333976-19334220]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19334057 rs28561505 C T no 129090
chr1 19334061 rs189081881 C T
STAT1
129091
Genes possibly regulated by vista604[chr1:19333976-19334220]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 13639
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 49204
Expression level of Genes
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miRNAs possibly regulated by vista604[chr1:19333976-19334220]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results