EnhancerDB
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  3. vista60423[chr8:125249599-125249607]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista60423[chr8:125249599-125249607]
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Tissue distribution of vista60423
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Transcription factor that possibly regulate vista60423[chr8:125249599-125249607]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr8 125249595 125249606 CDX2 JASPAR yes 48098013
chr8 125249595 125249606 CDX2 JASPAR yes 68420608
chr8 125249596 125249607 HOXA10 JASPAR yes 48098014
chr8 125249596 125249607 HOXA10 JASPAR yes 68420609
chr8 125249597 125249606 CDX1 JASPAR yes 48098015
chr8 125249597 125249606 CDX1 JASPAR yes 68420610
chr8 125249597 125249607 HOXA13 JASPAR yes 48098016
chr8 125249597 125249607 HOXB13 JASPAR yes 48098017
chr8 125249597 125249607 HOXD13 JASPAR yes 48098018
chr8 125249597 125249607 HOXA13 JASPAR yes 68420611
chr8 125249597 125249607 HOXB13 JASPAR yes 68420612
chr8 125249597 125249607 HOXD13 JASPAR yes 68420613
chr8 125249599 125249614 FOXP1 JASPAR yes 48098019
chr8 125249599 125249614 FOXP1 JASPAR yes 68420614
chr8 125249601 125249607 TBP TRANSFAC yes 48098020
chr8 125249601 125249607 TBP TRANSFAC yes 68420615
chr8 125249601 125249616 FOXP1 JASPAR yes 48098021
chr8 125249601 125249616 FOXP1 JASPAR yes 68420616
chr8 125249602 125249617 STAT2 JASPAR yes 48098022
chr8 125249602 125249617 STAT2 JASPAR yes 68420617
chr8 125249602 125249623 IRF1 JASPAR yes 48098023
chr8 125249602 125249623 IRF1 JASPAR yes 68420618
SNP sites on vista60423[chr8:125249599-125249607]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr8 125249602 rs199841952 T TA
CDX1 CDX2 FOXP1 HOXA10 HOXA13 HOXB13 HOXD13 IRF1 STAT2 TBP
10736981
chr8 125249602 rs561346816 T TA
CDX1 CDX2 FOXP1 HOXA10 HOXA13 HOXB13 HOXD13 IRF1 STAT2 TBP
10736982
chr8 125249602 rs76952267 T TA
CDX1 CDX2 FOXP1 HOXA10 HOXA13 HOXB13 HOXD13 IRF1 STAT2 TBP
10736983
Genes possibly regulated by vista60423[chr8:125249599-125249607]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista60423[chr8:125249599-125249607]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results