EnhancerDB
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  3. vista605[chr1:19336477-19336714]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista605[chr1:19336477-19336714]
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Tissue distribution of vista605
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Transcription factor that possibly regulate vista605[chr1:19336477-19336714]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19336485 19336497 CREB1 JASPAR yes 27170742
chr1 19336485 19336497 CREB1 JASPAR yes 118243023
chr1 19336505 19336516 TBX20 JASPAR yes 27170743
chr1 19336505 19336516 TBX20 JASPAR yes 118243024
chr1 19336506 19336514 TBX15 JASPAR yes 27170744
chr1 19336506 19336514 TBX15 JASPAR yes 118243025
chr1 19336507 19336512 SP1 TRANSFAC yes 27170745
chr1 19336507 19336512 SP1 TRANSFAC yes 118243026
chr1 19336538 19336542 YY1 TRANSFAC yes 27170746
chr1 19336538 19336542 YY1 TRANSFAC yes 118243027
chr1 19336548 19336553 SP1 TRANSFAC yes 27170747
chr1 19336548 19336553 SP1 TRANSFAC yes 118243028
chr1 19336550 19336561 E2F1 JASPAR yes 27170748
chr1 19336550 19336561 E2F1 JASPAR yes 118243029
chr1 19336561 19336575 NR2F1 JASPAR yes 27170749
chr1 19336561 19336575 NR2F1 JASPAR yes 118243030
chr1 19336567 19336575 CREB1 JASPAR yes 27170750
chr1 19336567 19336575 CREB1 JASPAR yes 118243031
chr1 19336568 19336576 NR4A2 JASPAR yes 27170751
chr1 19336568 19336576 NR4A2 JASPAR yes 118243032
chr1 19336569 19336586 RARA JASPAR yes 27170752
chr1 19336569 19336586 RARA JASPAR yes 118243033
chr1 19336570 19336574 ESR1 TRANSFAC yes 27170753
chr1 19336570 19336574 ESR1 TRANSFAC yes 118243034
chr1 19336573 19336587 PLAG1 JASPAR yes 27170754
chr1 19336573 19336587 PLAG1 JASPAR yes 118243035
chr1 19336583 19336594 FLI1 JASPAR yes 27170755
chr1 19336583 19336594 FLI1 JASPAR yes 118243036
chr1 19336585 19336593 EHF JASPAR yes 27170756
chr1 19336585 19336593 EHF JASPAR yes 118243037
chr1 19336591 19336601 TEAD1 JASPAR yes 27170757
chr1 19336591 19336601 TEAD1 JASPAR yes 118243038
chr1 19336591 19336603 TEAD1 JASPAR yes 27170758
chr1 19336591 19336603 TEAD1 JASPAR yes 118243039
chr1 19336592 19336600 TEAD3 JASPAR yes 27170759
chr1 19336592 19336600 TEAD3 JASPAR yes 118243040
chr1 19336665 19336678 POU2F2 JASPAR yes 27170760
chr1 19336665 19336678 POU2F2 JASPAR yes 118243041
chr1 19336676 19336687 TBX20 JASPAR yes 27170761
chr1 19336676 19336687 TBX20 JASPAR yes 118243042
chr1 19336681 19336686 MYC TRANSFAC yes 27170762
chr1 19336681 19336686 MYC TRANSFAC yes 118243043
chr1 19336695 19336699 LFA1 TRANSFAC yes 27170763
chr1 19336695 19336699 LFA1 TRANSFAC yes 118243044
SNP sites on vista605[chr1:19336477-19336714]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 19336497 rs116027267 C T
CREB1
129132
chr1 19336532 rs114788943 T A no 129133
chr1 19336541 rs2038879 T C
YY1
129134
chr1 19336552 rs531394806 G A
E2F1 SP1
129135
chr1 19336622 rs561514476 T G no 129136
chr1 19336639 rs529034262 T C no 129137
Genes possibly regulated by vista605[chr1:19336477-19336714]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19175767 19247615 - RP13-279N23.2 ENSG00000255275.3 19247615 0.98 0.94 253 11138
chr1 19230775 19283180 - IFFO2 ENSG00000169991.6 19283180 0.83 0.99 255 46703
Expression level of Genes
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miRNAs possibly regulated by vista605[chr1:19336477-19336714]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results