EnhancerDB
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  3. vista61858[chr9:35518041-35518590]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista61858[chr9:35518041-35518590]
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Tissue distribution of vista61858
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Transcription factor that possibly regulate vista61858[chr9:35518041-35518590]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr9 35517878 35518599 GATA3 UCSC Txn Factor no Conserved 108550283
chr9 35518007 35518601 EP300 UCSC Txn Factor no Conserved 108550284
chr9 35518101 35518576 TCF12 UCSC Txn Factor no Conserved 108550285
chr9 35518115 35518434 ESR1 UCSC Txn Factor no Conserved 108550286
chr9 35518127 35518641 SIN3AK20 UCSC Txn Factor no Conserved 108550287
chr9 35518143 35518485 BCL3 UCSC Txn Factor no Conserved 108550288
chr9 35518160 35518495 FOSL2 UCSC Txn Factor no Conserved 108550289
chr9 35518166 35518458 NR3C1 UCSC Txn Factor no Conserved 108550290
chr9 35518167 35518506 CEBPB UCSC Txn Factor no Conserved 108550291
chr9 35518189 35518521 TEAD4 UCSC Txn Factor no Conserved 108550292
chr9 35518228 35518430 ATF3 UCSC Txn Factor no Conserved 108550293
chr9 35518270 35518444 FOXA1 UCSC Txn Factor no Conserved 108550294
chr9 35518021 35518041 ESR1 JASPAR yes 83882624
chr9 35518021 35518041 ESR1 JASPAR yes 95348097
chr9 35518040 35518044 NFE TRANSFAC yes 83882627
chr9 35518040 35518044 NFE TRANSFAC yes 95348098
chr9 35518041 35518046 GATA2 JASPAR yes 83882628
chr9 35518041 35518046 GATA2 JASPAR yes 95348099
chr9 35518054 35518069 HSF1 JASPAR yes 83882629
chr9 35518054 35518069 HSF1 JASPAR yes 95348100
chr9 35518073 35518088 LEF1 JASPAR yes 83882630
chr9 35518073 35518088 LEF1 JASPAR yes 95348101
chr9 35518108 35518127 RFX2 JASPAR yes 83882631
chr9 35518108 35518127 RFX2 JASPAR yes 95348102
chr9 35518112 35518128 RFX3 JASPAR yes 83882632
chr9 35518112 35518128 RFX3 JASPAR yes 95348103
chr9 35518125 35518144 RFX2 JASPAR yes 83882633
chr9 35518125 35518144 RFX2 JASPAR yes 95348104
chr9 35518129 35518145 RFX4 JASPAR yes 83882634
chr9 35518129 35518145 RFX4 JASPAR yes 95348105
chr9 35518147 35518153 ZNF354C JASPAR yes 83882635
chr9 35518147 35518153 ZNF354C JASPAR yes 95348106
chr9 35518162 35518170 MEIS2 JASPAR yes 83882636
chr9 35518162 35518170 MEIS3 JASPAR yes 83882637
chr9 35518162 35518170 MEIS2 JASPAR yes 95348107
chr9 35518162 35518170 MEIS3 JASPAR yes 95348108
chr9 35518202 35518206 NFE TRANSFAC yes 83882638
chr9 35518202 35518206 NFE TRANSFAC yes 95348109
chr9 35518202 35518216 TLX1 JASPAR yes 83882639
chr9 35518202 35518216 TLX1 JASPAR yes 95348110
chr9 35518238 35518241 MYB TRANSFAC yes 83882640
chr9 35518238 35518241 MYB TRANSFAC yes 95348111
chr9 35518320 35518335 FOXA1 JASPAR yes 83882641
chr9 35518320 35518335 FOXA1 JASPAR yes 95348112
chr9 35518321 35518327 TCF4 TRANSFAC yes 83882642
chr9 35518321 35518327 TCF4 TRANSFAC yes 95348113
chr9 35518321 35518336 FOXP1 JASPAR yes 83882643
chr9 35518321 35518336 FOXP1 JASPAR yes 95348114
chr9 35518322 35518334 FOXC2 JASPAR yes 83882644
chr9 35518322 35518334 FOXC2 JASPAR yes 95348115
chr9 35518324 35518335 FOXA1 JASPAR yes 83882645
chr9 35518324 35518335 FOXA1 JASPAR yes 95348116
chr9 35518329 35518338 NKX2-8 JASPAR yes 83882646
chr9 35518329 35518338 NKX2-8 JASPAR yes 95348117
chr9 35518330 35518344 SPI1 JASPAR yes 83882647
chr9 35518330 35518344 SPI1 JASPAR yes 95348118
chr9 35518336 35518346 TEAD1 JASPAR yes 83882648
chr9 35518336 35518346 TEAD1 JASPAR yes 95348119
chr9 35518336 35518348 TEAD1 JASPAR yes 83882649
chr9 35518336 35518348 TEAD1 JASPAR yes 95348120
chr9 35518337 35518345 TEAD3 JASPAR yes 83882650
chr9 35518337 35518345 TEAD3 JASPAR yes 95348121
chr9 35518360 35518364 YY1 TRANSFAC yes 83882651
chr9 35518360 35518364 YY1 TRANSFAC yes 95348122
chr9 35518367 35518378 FOXH1 JASPAR yes 83882652
chr9 35518367 35518378 FOXH1 JASPAR yes 95348123
chr9 35518422 35518426 YY1 TRANSFAC yes 83882653
chr9 35518422 35518426 YY1 TRANSFAC yes 95348124
chr9 35518436 35518448 PKNOX1 JASPAR yes 83882654
chr9 35518436 35518448 PKNOX2 JASPAR yes 83882655
chr9 35518436 35518448 TGIF1 JASPAR yes 83882656
chr9 35518436 35518448 TGIF2 JASPAR yes 83882657
chr9 35518436 35518448 PKNOX1 JASPAR yes 95348125
chr9 35518436 35518448 PKNOX2 JASPAR yes 95348126
chr9 35518436 35518448 TGIF1 JASPAR yes 95348127
chr9 35518436 35518448 TGIF2 JASPAR yes 95348128
chr9 35518440 35518453 SMAD2 JASPAR yes 83882658
chr9 35518440 35518453 SMAD2 JASPAR yes 95348129
chr9 35518442 35518446 NFE TRANSFAC yes 83882659
chr9 35518442 35518446 NFE TRANSFAC yes 95348130
chr9 35518442 35518463 ZNF263 JASPAR yes 83882660
chr9 35518442 35518463 ZNF263 JASPAR yes 95348131
chr9 35518462 35518466 NFE TRANSFAC yes 83882661
chr9 35518462 35518466 NFE TRANSFAC yes 95348132
chr9 35518462 35518475 SMAD2 JASPAR yes 83882662
chr9 35518462 35518475 SMAD2 JASPAR yes 95348133
chr9 35518476 35518480 LFA1 TRANSFAC yes 83882663
chr9 35518476 35518480 LFA1 TRANSFAC yes 95348134
chr9 35518502 35518515 TFAP2B JASPAR yes 83882664
chr9 35518502 35518515 TFAP2B JASPAR yes 95348135
chr9 35518523 35518528 GATA2 JASPAR yes 83882665
chr9 35518523 35518528 GATA2 JASPAR yes 95348136
chr9 35518526 35518531 GATA2 JASPAR yes 83882666
chr9 35518526 35518531 GATA2 JASPAR yes 95348137
chr9 35518527 35518533 ZNF354C JASPAR yes 83882667
chr9 35518527 35518533 ZNF354C JASPAR yes 95348138
chr9 35518554 35518569 HNF4G JASPAR yes 83882668
chr9 35518554 35518569 HNF4G JASPAR yes 95348139
chr9 35518558 35518562 TEAD2 TRANSFAC yes 83882669
chr9 35518558 35518562 TEAD2 TRANSFAC yes 95348140
chr9 35518558 35518563 TBP TRANSFAC yes 83882670
chr9 35518558 35518563 TBP TRANSFAC yes 95348141
SNP sites on vista61858[chr9:35518041-35518590]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr9 35518087 rs117783123 C T
EP300 GATA3 LEF1
11003911
chr9 35518227 rs72725066 T C
BCL3 CEBPB EP300 ESR1 FOSL2 GATA3 NR3C1 SIN3AK20 TCF12 TEAD4
11003912
chr9 35518245 rs538638077 G A
ATF3 BCL3 CEBPB EP300 ESR1 FOSL2 GATA3 NR3C1 SIN3AK20 TCF12 TEAD4
11003913
chr9 35518277 rs370019359 G A
ATF3 BCL3 CEBPB EP300 ESR1 FOSL2 FOXA1 GATA3 NR3C1 SIN3AK20 TCF12 TEAD4
11003914
chr9 35518298 rs140974265 C T
ATF3 BCL3 CEBPB EP300 ESR1 FOSL2 FOXA1 GATA3 NR3C1 SIN3AK20 TCF12 TEAD4
11003915
chr9 35518326 rs575068780 G A
ATF3 BCL3 CEBPB EP300 ESR1 FOSL2 FOXA1 FOXC2 FOXP1 GATA3 NR3C1 SIN3AK20 TCF12 TCF4 TEAD4
11003916
Genes possibly regulated by vista61858[chr9:35518041-35518590]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr9 35490124 35561895 + RUSC2 ENSG00000198853.7 35490124 0.71 1.0 8926 72083
chr9 35561828 35563896 - FAM166B ENSG00000215187.5 35563896 0.99 1.0 8927 54694
chr9 35605367 35610038 + TESK1 ENSG00000107140.11 35605367 0.62 1.0 8928 13223
Expression level of Genes
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miRNAs possibly regulated by vista61858[chr9:35518041-35518590]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results