EnhancerDB
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  3. vista61885[chr9:36294075-36294254]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista61885[chr9:36294075-36294254]
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Tissue distribution of vista61885
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Transcription factor that possibly regulate vista61885[chr9:36294075-36294254]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr9 36294061 36294075 ZIC1 JASPAR yes 83916260
chr9 36294061 36294075 ZIC1 JASPAR yes 95349337
chr9 36294061 36294076 ZIC3 JASPAR yes 83916261
chr9 36294061 36294076 ZIC4 JASPAR yes 83916262
chr9 36294061 36294076 ZIC3 JASPAR yes 95349338
chr9 36294061 36294076 ZIC4 JASPAR yes 95349339
chr9 36294085 36294096 STAT1 JASPAR yes 83916263
chr9 36294085 36294096 STAT1 JASPAR yes 95349340
chr9 36294087 36294101 PLAG1 JASPAR yes 83916264
chr9 36294087 36294101 PLAG1 JASPAR yes 95349341
chr9 36294100 36294109 NKX2-8 JASPAR yes 83916265
chr9 36294100 36294109 NKX2-8 JASPAR yes 95349342
chr9 36294100 36294110 NKX2-3 JASPAR yes 83916266
chr9 36294100 36294110 NKX2-3 JASPAR yes 95349343
chr9 36294124 36294129 ETS2 TRANSFAC yes 83916267
chr9 36294124 36294129 ETS2 TRANSFAC yes 95349344
chr9 36294140 36294144 LFA1 TRANSFAC yes 83916268
chr9 36294140 36294144 LFA1 TRANSFAC yes 95349345
chr9 36294152 36294160 TEAD3 JASPAR yes 83916269
chr9 36294152 36294160 TEAD3 JASPAR yes 95349346
chr9 36294170 36294185 SCRT1 JASPAR yes 83916270
chr9 36294170 36294185 SCRT1 JASPAR yes 95349347
chr9 36294189 36294194 TFAP2A TRANSFAC yes 83916271
chr9 36294189 36294194 TFAP2A TRANSFAC yes 95349348
chr9 36294189 36294195 MZF1 JASPAR yes 83916272
chr9 36294189 36294195 MZF1 JASPAR yes 95349349
chr9 36294198 36294208 GCM2 JASPAR yes 83916273
chr9 36294198 36294208 GCM2 JASPAR yes 95349350
chr9 36294198 36294209 GCM1 JASPAR yes 83916274
chr9 36294198 36294209 GCM1 JASPAR yes 95349351
chr9 36294202 36294213 NFKB1 JASPAR yes 83916275
chr9 36294202 36294213 NFKB1 JASPAR yes 95349352
chr9 36294203 36294207 LFA1 TRANSFAC yes 83916276
chr9 36294203 36294207 LFA1 TRANSFAC yes 95349353
chr9 36294203 36294213 NFKB1 JASPAR yes 83916277
chr9 36294203 36294213 NFKB1 JASPAR yes 95349354
chr9 36294206 36294220 EBF1 JASPAR yes 83916278
chr9 36294206 36294220 EBF1 JASPAR yes 95349355
chr9 36294207 36294218 EBF1 JASPAR yes 83916279
chr9 36294207 36294218 EBF1 JASPAR yes 95349356
chr9 36294208 36294214 MZF1 JASPAR yes 83916280
chr9 36294208 36294214 MZF1 JASPAR yes 95349357
chr9 36294227 36294230 MYB TRANSFAC yes 83916281
chr9 36294227 36294230 MYB TRANSFAC yes 95349358
chr9 36294227 36294236 RUNX2 JASPAR yes 83916282
chr9 36294227 36294236 RUNX2 JASPAR yes 95349359
chr9 36294227 36294237 RUNX3 JASPAR yes 83916283
chr9 36294227 36294237 RUNX3 JASPAR yes 95349360
chr9 36294227 36294238 RUNX1 JASPAR yes 83916284
chr9 36294227 36294238 RUNX1 JASPAR yes 95349361
chr9 36294241 36294247 LEF1 TRANSFAC yes 83916285
chr9 36294241 36294247 TCF4 TRANSFAC yes 83916286
chr9 36294241 36294247 LEF1 TRANSFAC yes 95349362
chr9 36294241 36294247 TCF4 TRANSFAC yes 95349363
SNP sites on vista61885[chr9:36294075-36294254]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr9 36294082 rs541657410 A G no 11007524
chr9 36294118 rs13299891 G T no 11007525
chr9 36294203 rs369129217 C T
GCM1 GCM2 LFA1 NFKB1
11007526
chr9 36294204 rs141472121 G A
GCM1 GCM2 LFA1 NFKB1
11007527
chr9 36294219 rs192183442 C A
EBF1
11007528
Genes possibly regulated by vista61885[chr9:36294075-36294254]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr9 36214438 36277053 - GNE ENSG00000159921.10 36277053 0.82 0.98 8952 82978
Expression level of Genes
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miRNAs possibly regulated by vista61885[chr9:36294075-36294254]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results