EnhancerDB
  1. Home
  2. Enhancers
  3. vista61940[chr9:38107573-38107665]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista61940[chr9:38107573-38107665]
Back to top
Tissue distribution of vista61940
Back to top
Transcription factor that possibly regulate vista61940[chr9:38107573-38107665]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr9 38107583 38107592 NKX2-8 JASPAR yes 84033792
chr9 38107583 38107592 NKX2-8 JASPAR yes 95352015
chr9 38107583 38107593 NKX2-3 JASPAR yes 84033793
chr9 38107583 38107593 NKX2-3 JASPAR yes 95352016
chr9 38107584 38107592 ISL2 JASPAR yes 84033794
chr9 38107584 38107592 ISL2 JASPAR yes 95352017
chr9 38107584 38107593 NKX3-2 JASPAR yes 84033795
chr9 38107584 38107593 NKX3-2 JASPAR yes 95352018
chr9 38107598 38107619 IRF1 JASPAR yes 84033796
chr9 38107598 38107619 IRF1 JASPAR yes 95352019
chr9 38107600 38107615 PRDM1 JASPAR yes 84033797
chr9 38107600 38107615 PRDM1 JASPAR yes 95352020
chr9 38107609 38107613 NFE TRANSFAC yes 84033798
chr9 38107609 38107613 NFE TRANSFAC yes 95352021
chr9 38107613 38107619 LEF1 TRANSFAC yes 84033799
chr9 38107613 38107619 SOX10 JASPAR yes 84033800
chr9 38107613 38107619 LEF1 TRANSFAC yes 95352022
chr9 38107613 38107619 SOX10 JASPAR yes 95352023
chr9 38107622 38107637 HNF4G JASPAR yes 84033801
chr9 38107622 38107637 HNF4G JASPAR yes 95352024
chr9 38107623 38107638 HNF4A JASPAR yes 84033802
chr9 38107623 38107638 HNF4A JASPAR yes 95352025
chr9 38107639 38107642 MYB TRANSFAC yes 84033803
chr9 38107639 38107642 MYB TRANSFAC yes 95352026
chr9 38107651 38107662 FLI1 JASPAR yes 84033804
chr9 38107651 38107662 FLI1 JASPAR yes 95352027
chr9 38107652 38107656 YY1 TRANSFAC yes 84033805
chr9 38107652 38107656 YY1 TRANSFAC yes 95352028
chr9 38107652 38107662 ETV6 JASPAR yes 84033806
chr9 38107652 38107662 ETV6 JASPAR yes 95352029
chr9 38107652 38107663 ETV2 JASPAR yes 84033807
chr9 38107652 38107663 ETV2 JASPAR yes 95352030
chr9 38107652 38107665 ELF1 JASPAR yes 84033808
chr9 38107652 38107665 ELF1 JASPAR yes 95352031
chr9 38107653 38107661 FEV JASPAR yes 84033809
chr9 38107653 38107661 FEV JASPAR yes 95352032
chr9 38107655 38107662 SPIB JASPAR yes 84033810
chr9 38107655 38107662 SPIB JASPAR yes 95352033
SNP sites on vista61940[chr9:38107573-38107665]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr9 38107613 rs181918121 T G
IRF1 LEF1 NFE PRDM1 SOX10
11018774
chr9 38107623 rs371004391 A G
HNF4A HNF4G
11018775
Genes possibly regulated by vista61940[chr9:38107573-38107665]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr9 37588410 38068684 - RP11-613M10.9 ENSG00000255872.3 38068684 0.92 0.89 8963 61111
chr9 37919131 38069210 - SHB ENSG00000107338.8 38069210 0.71 0.99 8969 61637
Expression level of Genes
Back to top
miRNAs possibly regulated by vista61940[chr9:38107573-38107665]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results