EnhancerDB
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  3. vista623[chr1:19839147-19839427]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista623[chr1:19839147-19839427]
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Tissue distribution of vista623
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Transcription factor that possibly regulate vista623[chr1:19839147-19839427]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 19839153 19839158 GATA2 JASPAR yes 27199431
chr1 19839153 19839158 GATA2 JASPAR yes 118243710
chr1 19839178 19839181 MYB TRANSFAC yes 27199432
chr1 19839178 19839181 MYB TRANSFAC yes 118243711
chr1 19839192 19839196 NFE TRANSFAC yes 27199433
chr1 19839192 19839196 NFE TRANSFAC yes 118243712
chr1 19839199 19839203 TEAD2 TRANSFAC yes 27199434
chr1 19839199 19839203 TEAD2 TRANSFAC yes 118243713
chr1 19839216 19839227 GCM1 JASPAR yes 27199435
chr1 19839216 19839227 GCM1 JASPAR yes 118243714
chr1 19839217 19839227 GCM2 JASPAR yes 27199436
chr1 19839217 19839227 GCM2 JASPAR yes 118243715
chr1 19839225 19839231 NFIC JASPAR yes 27199437
chr1 19839225 19839231 NFIC JASPAR yes 118243716
chr1 19839227 19839231 H1TF2 TRANSFAC yes 27199438
chr1 19839227 19839231 NFE TRANSFAC yes 27199439
chr1 19839227 19839231 SRF TRANSFAC yes 27199440
chr1 19839227 19839231 H1TF2 TRANSFAC yes 118243717
chr1 19839227 19839231 NFE TRANSFAC yes 118243718
chr1 19839227 19839231 SRF TRANSFAC yes 118243719
chr1 19839228 19839239 PROP1 JASPAR yes 27199441
chr1 19839228 19839239 PROP1 JASPAR yes 118243720
chr1 19839234 19839238 YY1 TRANSFAC yes 27199442
chr1 19839234 19839238 YY1 TRANSFAC yes 118243721
chr1 19839262 19839272 ZNF740 JASPAR yes 27199443
chr1 19839262 19839272 ZNF740 JASPAR yes 118243722
chr1 19839291 19839297 MZF1 JASPAR yes 27199444
chr1 19839291 19839297 MZF1 JASPAR yes 118243723
chr1 19839292 19839304 HES5 JASPAR yes 27199445
chr1 19839292 19839304 HES7 JASPAR yes 27199446
chr1 19839292 19839304 HES5 JASPAR yes 118243724
chr1 19839292 19839304 HES7 JASPAR yes 118243725
chr1 19839293 19839303 CLOCK JASPAR yes 27199447
chr1 19839293 19839303 HEY1 JASPAR yes 27199448
chr1 19839293 19839303 HEY2 JASPAR yes 27199449
chr1 19839293 19839303 MAX JASPAR yes 27199450
chr1 19839293 19839303 MNT JASPAR yes 27199451
chr1 19839293 19839303 CLOCK JASPAR yes 118243726
chr1 19839293 19839303 HEY1 JASPAR yes 118243727
chr1 19839293 19839303 HEY2 JASPAR yes 118243728
chr1 19839293 19839303 MAX JASPAR yes 118243729
chr1 19839293 19839303 MNT JASPAR yes 118243730
chr1 19839294 19839301 USF1 JASPAR yes 27199452
chr1 19839294 19839301 USF1 JASPAR yes 118243731
chr1 19839294 19839304 MAX JASPAR yes 27199453
chr1 19839294 19839304 MAX JASPAR yes 118243732
chr1 19839295 19839300 MYC TRANSFAC yes 27199454
chr1 19839295 19839300 USF1 TRANSFAC yes 27199455
chr1 19839295 19839300 USF2 TRANSFAC yes 27199456
chr1 19839295 19839300 MYC TRANSFAC yes 118243733
chr1 19839295 19839300 USF1 TRANSFAC yes 118243734
chr1 19839295 19839300 USF2 TRANSFAC yes 118243735
chr1 19839305 19839311 MAZ TRANSFAC yes 27199457
chr1 19839305 19839311 MAZ TRANSFAC yes 118243736
chr1 19839313 19839327 GLIS3 JASPAR yes 27199458
chr1 19839313 19839327 GLIS3 JASPAR yes 118243737
chr1 19839316 19839321 SP1 TRANSFAC yes 27199459
chr1 19839316 19839321 SP1 TRANSFAC yes 118243738
chr1 19839318 19839336 NFYA JASPAR yes 27199460
chr1 19839318 19839336 NFYA JASPAR yes 118243739
chr1 19839321 19839337 NFYA JASPAR yes 27199461
chr1 19839321 19839337 NFYA JASPAR yes 118243740
chr1 19839321 19839339 RARA JASPAR yes 27199462
chr1 19839321 19839339 RARA JASPAR yes 118243741
chr1 19839324 19839337 DUXA JASPAR yes 27199463
chr1 19839324 19839337 DUXA JASPAR yes 118243742
chr1 19839324 19839339 NFYB JASPAR yes 27199464
chr1 19839324 19839339 NFYB JASPAR yes 118243743
chr1 19839325 19839336 DUX4 JASPAR yes 27199465
chr1 19839325 19839336 DUX4 JASPAR yes 118243744
chr1 19839326 19839331 NFY TRANSFAC yes 27199466
chr1 19839326 19839331 NFY TRANSFAC yes 118243745
chr1 19839334 19839344 GCM2 JASPAR yes 27199467
chr1 19839334 19839344 GCM2 JASPAR yes 118243746
chr1 19839335 19839345 ZNF740 JASPAR yes 27199468
chr1 19839335 19839345 ZNF740 JASPAR yes 118243747
chr1 19839341 19839351 RELA JASPAR yes 27199469
chr1 19839341 19839351 RELA JASPAR yes 118243748
chr1 19839342 19839352 RELA JASPAR yes 27199470
chr1 19839342 19839352 RELA JASPAR yes 118243749
chr1 19839342 19839353 NFKB1 JASPAR yes 27199471
chr1 19839342 19839353 NFKB1 JASPAR yes 118243750
chr1 19839343 19839353 NFKB1 JASPAR yes 27199472
chr1 19839343 19839353 RELA JASPAR yes 27199473
chr1 19839343 19839353 REL JASPAR yes 27199474
chr1 19839343 19839353 NFKB1 JASPAR yes 118243751
chr1 19839343 19839353 RELA JASPAR yes 118243752
chr1 19839343 19839353 REL JASPAR yes 118243753
chr1 19839347 19839357 MZF1 JASPAR yes 27199475
chr1 19839347 19839357 MZF1 JASPAR yes 118243754
chr1 19839347 19839359 INSM1 JASPAR yes 27199476
chr1 19839347 19839359 INSM1 JASPAR yes 118243755
chr1 19839407 19839425 RARA JASPAR yes 27199477
chr1 19839407 19839425 RARA JASPAR yes 118243756
chr1 19839409 19839424 HNF4A JASPAR yes 27199478
chr1 19839409 19839424 HNF4A JASPAR yes 118243757
chr1 19839410 19839425 NR2C2 JASPAR yes 27199479
chr1 19839410 19839425 NR2C2 JASPAR yes 118243758
chr1 19839412 19839433 ZNF263 JASPAR yes 27199480
chr1 19839412 19839433 ZNF263 JASPAR yes 118243759
chr1 19839415 19839436 ZNF263 JASPAR yes 27199481
chr1 19839415 19839436 ZNF263 JASPAR yes 118243760
chr1 19839418 19839433 LEF1 JASPAR yes 27199482
chr1 19839418 19839433 LEF1 JASPAR yes 118243761
chr1 19839419 19839433 TCF7L2 JASPAR yes 27199483
chr1 19839419 19839433 TCF7L2 JASPAR yes 118243762
chr1 19839419 19839440 ZNF263 JASPAR yes 27199484
chr1 19839419 19839440 ZNF263 JASPAR yes 118243763
chr1 19839422 19839428 LEF1 TRANSFAC yes 27199485
chr1 19839422 19839428 SOX10 JASPAR yes 27199486
chr1 19839422 19839428 LEF1 TRANSFAC yes 118243764
chr1 19839422 19839428 SOX10 JASPAR yes 118243765
SNP sites on vista623[chr1:19839147-19839427]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista623[chr1:19839147-19839427]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19665267 19812066 - CAPZB ENSG00000077549.13 19812066 0.66 0.99 262 72919
chr1 19923473 19984549 + MINOS1-NBL1 ENSG00000270136.1 19923473 0.98 0.96 263 15954
chr1 19923477 19956314 + MINOS1 ENSG00000173436.9 19923477 0.94 0.93 264 15950
Expression level of Genes
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miRNAs possibly regulated by vista623[chr1:19839147-19839427]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results