EnhancerDB
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  3. vista625[chr1:20091332-20091506]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista625[chr1:20091332-20091506]
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Tissue distribution of vista625
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Transcription factor that possibly regulate vista625[chr1:20091332-20091506]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20091315 20091333 IRF2 JASPAR yes 27216020
chr1 20091315 20091333 IRF2 JASPAR yes 118243793
chr1 20091328 20091332 NFE TRANSFAC yes 27216021
chr1 20091328 20091332 NFE TRANSFAC yes 118243794
chr1 20091332 20091347 FOXP1 JASPAR yes 27216022
chr1 20091332 20091347 FOXP1 JASPAR yes 118243795
chr1 20091333 20091348 FOXP1 JASPAR yes 27216023
chr1 20091333 20091348 FOXP1 JASPAR yes 118243796
chr1 20091334 20091349 FOXP1 JASPAR yes 27216024
chr1 20091334 20091349 FOXP1 JASPAR yes 118243797
chr1 20091334 20091355 IRF1 JASPAR yes 27216025
chr1 20091334 20091355 IRF1 JASPAR yes 118243798
chr1 20091335 20091350 FOXP1 JASPAR yes 27216026
chr1 20091335 20091350 FOXP1 JASPAR yes 118243799
chr1 20091335 20091356 IRF1 JASPAR yes 27216027
chr1 20091335 20091356 IRF1 JASPAR yes 118243800
chr1 20091336 20091351 FOXP1 JASPAR yes 27216028
chr1 20091336 20091351 FOXP1 JASPAR yes 118243801
chr1 20091336 20091357 IRF1 JASPAR yes 27216029
chr1 20091336 20091357 IRF1 JASPAR yes 118243802
chr1 20091337 20091352 FOXP1 JASPAR yes 27216030
chr1 20091337 20091352 FOXP1 JASPAR yes 118243803
chr1 20091337 20091358 IRF1 JASPAR yes 27216031
chr1 20091337 20091358 IRF1 JASPAR yes 118243804
chr1 20091338 20091353 FOXP1 JASPAR yes 27216032
chr1 20091338 20091353 FOXP1 JASPAR yes 118243805
chr1 20091338 20091359 IRF1 JASPAR yes 27216033
chr1 20091338 20091359 IRF1 JASPAR yes 118243806
chr1 20091339 20091354 FOXP1 JASPAR yes 27216034
chr1 20091339 20091354 FOXP1 JASPAR yes 118243807
chr1 20091339 20091360 IRF1 JASPAR yes 27216035
chr1 20091339 20091360 IRF1 JASPAR yes 118243808
chr1 20091340 20091355 FOXP1 JASPAR yes 27216036
chr1 20091340 20091355 FOXP1 JASPAR yes 118243809
chr1 20091340 20091361 IRF1 JASPAR yes 27216037
chr1 20091340 20091361 IRF1 JASPAR yes 118243810
chr1 20091341 20091356 FOXP1 JASPAR yes 27216038
chr1 20091341 20091356 FOXP1 JASPAR yes 118243811
chr1 20091341 20091362 IRF1 JASPAR yes 27216039
chr1 20091341 20091362 IRF1 JASPAR yes 118243812
chr1 20091342 20091357 FOXP1 JASPAR yes 27216040
chr1 20091342 20091357 FOXP1 JASPAR yes 118243813
chr1 20091342 20091363 IRF1 JASPAR yes 27216041
chr1 20091342 20091363 IRF1 JASPAR yes 118243814
chr1 20091343 20091358 FOXP1 JASPAR yes 27216042
chr1 20091343 20091358 FOXP1 JASPAR yes 118243815
chr1 20091343 20091364 IRF1 JASPAR yes 27216043
chr1 20091343 20091364 IRF1 JASPAR yes 118243816
chr1 20091344 20091359 FOXP1 JASPAR yes 27216044
chr1 20091344 20091359 FOXP1 JASPAR yes 118243817
chr1 20091344 20091365 IRF1 JASPAR yes 27216045
chr1 20091344 20091365 IRF1 JASPAR yes 118243818
chr1 20091345 20091360 FOXP1 JASPAR yes 27216046
chr1 20091345 20091360 FOXP1 JASPAR yes 118243819
chr1 20091345 20091366 IRF1 JASPAR yes 27216047
chr1 20091345 20091366 IRF1 JASPAR yes 118243820
chr1 20091346 20091361 FOXP1 JASPAR yes 27216048
chr1 20091346 20091361 FOXP1 JASPAR yes 118243821
chr1 20091346 20091367 IRF1 JASPAR yes 27216049
chr1 20091346 20091367 IRF1 JASPAR yes 118243822
chr1 20091347 20091362 FOXP1 JASPAR yes 27216050
chr1 20091347 20091362 FOXP1 JASPAR yes 118243823
chr1 20091348 20091363 FOXP1 JASPAR yes 27216051
chr1 20091348 20091363 FOXP1 JASPAR yes 118243824
chr1 20091354 20091368 SPI1 JASPAR yes 27216052
chr1 20091354 20091368 SPIC JASPAR yes 27216053
chr1 20091354 20091368 SPI1 JASPAR yes 118243825
chr1 20091354 20091368 SPIC JASPAR yes 118243826
chr1 20091383 20091395 PKNOX2 JASPAR yes 27216054
chr1 20091383 20091395 PKNOX2 JASPAR yes 118243827
chr1 20091384 20091395 USF1 JASPAR yes 27216055
chr1 20091384 20091395 USF2 JASPAR yes 27216056
chr1 20091384 20091395 USF1 JASPAR yes 118243828
chr1 20091384 20091395 USF2 JASPAR yes 118243829
chr1 20091392 20091407 FOXA1 JASPAR yes 27216057
chr1 20091392 20091407 FOXA1 JASPAR yes 118243830
chr1 20091394 20091406 FOXC2 JASPAR yes 27216058
chr1 20091394 20091406 FOXC2 JASPAR yes 118243831
chr1 20091394 20091407 POU2F2 JASPAR yes 27216059
chr1 20091394 20091407 POU2F2 JASPAR yes 118243832
chr1 20091394 20091408 POU1F1 JASPAR yes 27216060
chr1 20091394 20091408 POU1F1 JASPAR yes 118243833
chr1 20091395 20091406 FOXB1 JASPAR yes 27216061
chr1 20091395 20091406 FOXC1 JASPAR yes 27216062
chr1 20091395 20091406 FOXB1 JASPAR yes 118243834
chr1 20091395 20091406 FOXC1 JASPAR yes 118243835
chr1 20091395 20091407 POU3F1 JASPAR yes 27216063
chr1 20091395 20091407 POU3F2 JASPAR yes 27216064
chr1 20091395 20091407 POU3F1 JASPAR yes 118243836
chr1 20091395 20091407 POU3F2 JASPAR yes 118243837
chr1 20091395 20091408 POU3F3 JASPAR yes 27216065
chr1 20091395 20091408 POU3F3 JASPAR yes 118243838
chr1 20091396 20091400 YY1 TRANSFAC yes 27216066
chr1 20091396 20091400 YY1 TRANSFAC yes 118243839
chr1 20091396 20091407 FOXA1 JASPAR yes 27216067
chr1 20091396 20091407 FOXA1 JASPAR yes 118243840
chr1 20091396 20091408 POU2F1 JASPAR yes 27216068
chr1 20091396 20091408 POU2F1 JASPAR yes 118243841
chr1 20091397 20091404 POU2F1 TRANSFAC yes 27216069
chr1 20091397 20091404 POU2F2C TRANSFAC yes 27216070
chr1 20091397 20091404 POU2F2 TRANSFAC yes 27216071
chr1 20091397 20091404 POU2F1 TRANSFAC yes 118243842
chr1 20091397 20091404 POU2F2C TRANSFAC yes 118243843
chr1 20091397 20091404 POU2F2 TRANSFAC yes 118243844
chr1 20091397 20091405 POU2F1 TRANSFAC yes 27216072
chr1 20091397 20091405 POU2F1 TRANSFAC yes 118243845
chr1 20091397 20091406 POU3F4 JASPAR yes 27216073
chr1 20091397 20091406 POU5F1B JASPAR yes 27216074
chr1 20091397 20091406 POU3F4 JASPAR yes 118243846
chr1 20091397 20091406 POU5F1B JASPAR yes 118243847
chr1 20091402 20091406 YY1 TRANSFAC yes 27216075
chr1 20091402 20091406 YY1 TRANSFAC yes 118243848
chr1 20091421 20091432 TBX2 JASPAR yes 27216076
chr1 20091421 20091432 TBX2 JASPAR yes 118243849
chr1 20091423 20091426 MYB TRANSFAC yes 27216077
chr1 20091423 20091426 MYB TRANSFAC yes 118243850
chr1 20091423 20091431 MGA JASPAR yes 27216078
chr1 20091423 20091431 TBX15 JASPAR yes 27216079
chr1 20091423 20091431 TBX1 JASPAR yes 27216080
chr1 20091423 20091431 TBX4 JASPAR yes 27216081
chr1 20091423 20091431 TBX5 JASPAR yes 27216082
chr1 20091423 20091431 MGA JASPAR yes 118243851
chr1 20091423 20091431 TBX15 JASPAR yes 118243852
chr1 20091423 20091431 TBX1 JASPAR yes 118243853
chr1 20091423 20091431 TBX4 JASPAR yes 118243854
chr1 20091423 20091431 TBX5 JASPAR yes 118243855
chr1 20091435 20091449 IRF8 JASPAR yes 27216083
chr1 20091435 20091449 IRF8 JASPAR yes 118243856
chr1 20091439 20091450 FOS JASPAR yes 27216084
chr1 20091439 20091450 FOSL1 JASPAR yes 27216085
chr1 20091439 20091450 JUND JASPAR yes 27216086
chr1 20091439 20091450 FOS JASPAR yes 118243857
chr1 20091439 20091450 FOSL1 JASPAR yes 118243858
chr1 20091439 20091450 JUND JASPAR yes 118243859
chr1 20091452 20091462 SP1 JASPAR yes 27216087
chr1 20091452 20091462 SP1 JASPAR yes 118243860
chr1 20091453 20091463 SP1 JASPAR yes 27216088
chr1 20091453 20091463 SP1 JASPAR yes 118243861
chr1 20091471 20091482 CDX2 JASPAR yes 27216089
chr1 20091471 20091482 CDX2 JASPAR yes 118243862
chr1 20091472 20091483 HOXA10 JASPAR yes 27216090
chr1 20091472 20091483 HOXA10 JASPAR yes 118243863
chr1 20091473 20091482 CDX1 JASPAR yes 27216091
chr1 20091473 20091482 CDX1 JASPAR yes 118243864
chr1 20091474 20091486 FOXI1 JASPAR yes 27216092
chr1 20091474 20091486 FOXI1 JASPAR yes 118243865
chr1 20091497 20091511 XBP1 JASPAR yes 27216093
chr1 20091497 20091511 XBP1 JASPAR yes 118243866
chr1 20091498 20091512 CREB3 JASPAR yes 27216094
chr1 20091498 20091512 CREB3L1 JASPAR yes 27216095
chr1 20091498 20091512 CREB3 JASPAR yes 118243867
chr1 20091498 20091512 CREB3L1 JASPAR yes 118243868
SNP sites on vista625[chr1:20091332-20091506]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20091335 rs570436956 CAAAAAAAAAA C
FOXP1 IRF1
134631
chr1 20091400 rs148577613 T G
FOXA1 FOXB1 FOXC1 FOXC2 POU1F1 POU2F1 POU2F2 POU2F2C POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B YY1
134632
chr1 20091436 rs61768313 T C,G
IRF8
134633
Genes possibly regulated by vista625[chr1:20091332-20091506]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 19991780 20006055 + HTR6 ENSG00000158748.3 19991780 0.95 1.0 266 448
chr1 20008706 20126438 - TMCO4 ENSG00000162542.9 20126438 0.68 1.0 267 65068
chr1 20140523 20141771 - RNF186 ENSG00000178828.5 20141771 0.97 0.0 268 49735
Expression level of Genes
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miRNAs possibly regulated by vista625[chr1:20091332-20091506]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results