EnhancerDB
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  3. vista626[chr1:20111066-20111358]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista626[chr1:20111066-20111358]
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Tissue distribution of vista626
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Transcription factor that possibly regulate vista626[chr1:20111066-20111358]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20111122 20111140 ESR1 JASPAR yes 27216612
chr1 20111122 20111140 ESR2 JASPAR yes 27216613
chr1 20111122 20111140 ESR1 JASPAR yes 118243869
chr1 20111122 20111140 ESR2 JASPAR yes 118243870
chr1 20111123 20111138 ESR2 JASPAR yes 27216614
chr1 20111123 20111138 ESR2 JASPAR yes 118243871
chr1 20111128 20111141 NR2F1 JASPAR yes 27216615
chr1 20111128 20111141 NR2F1 JASPAR yes 118243872
chr1 20111129 20111147 RARA JASPAR yes 27216616
chr1 20111129 20111147 RARA JASPAR yes 118243873
chr1 20111130 20111141 ESRRA JASPAR yes 27216617
chr1 20111130 20111141 ESRRA JASPAR yes 118243874
chr1 20111131 20111139 NR4A2 JASPAR yes 27216618
chr1 20111131 20111139 NR4A2 JASPAR yes 118243875
chr1 20111132 20111142 RORA JASPAR yes 27216619
chr1 20111132 20111142 RORA JASPAR yes 118243876
chr1 20111132 20111149 RARA JASPAR yes 27216620
chr1 20111132 20111149 RARA JASPAR yes 118243877
chr1 20111196 20111206 SREBF2 JASPAR yes 27216621
chr1 20111196 20111206 SREBF2 JASPAR yes 118243878
chr1 20111197 20111210 ZBTB18 JASPAR yes 27216622
chr1 20111197 20111210 ZBTB18 JASPAR yes 118243879
chr1 20111205 20111210 GATA2 JASPAR yes 27216623
chr1 20111205 20111210 GATA2 JASPAR yes 118243880
chr1 20111214 20111218 H1TF2 TRANSFAC yes 27216624
chr1 20111214 20111218 NFE TRANSFAC yes 27216625
chr1 20111214 20111218 SRF TRANSFAC yes 27216626
chr1 20111214 20111218 H1TF2 TRANSFAC yes 118243881
chr1 20111214 20111218 NFE TRANSFAC yes 118243882
chr1 20111214 20111218 SRF TRANSFAC yes 118243883
chr1 20111227 20111233 YY1 JASPAR yes 27216627
chr1 20111227 20111233 YY1 JASPAR yes 118243884
chr1 20111232 20111248 GLIS1 JASPAR yes 27216628
chr1 20111232 20111248 GLIS1 JASPAR yes 118243885
chr1 20111246 20111250 H1TF2 TRANSFAC yes 27216629
chr1 20111246 20111250 NFE TRANSFAC yes 27216630
chr1 20111246 20111250 SRF TRANSFAC yes 27216631
chr1 20111246 20111250 H1TF2 TRANSFAC yes 118243886
chr1 20111246 20111250 NFE TRANSFAC yes 118243887
chr1 20111246 20111250 SRF TRANSFAC yes 118243888
chr1 20111302 20111313 FOXH1 JASPAR yes 27216632
chr1 20111302 20111313 FOXH1 JASPAR yes 118243889
chr1 20111312 20111315 MYB TRANSFAC yes 27216633
chr1 20111312 20111315 MYB TRANSFAC yes 118243890
chr1 20111315 20111319 YY1 TRANSFAC yes 27216634
chr1 20111315 20111319 YY1 TRANSFAC yes 118243891
chr1 20111316 20111326 BARHL2 JASPAR yes 27216635
chr1 20111316 20111326 BARHL2 JASPAR yes 118243892
chr1 20111326 20111339 ATF4 JASPAR yes 27216636
chr1 20111326 20111339 ATF4 JASPAR yes 118243893
chr1 20111335 20111350 FOXP1 JASPAR yes 27216637
chr1 20111335 20111350 FOXP1 JASPAR yes 118243894
chr1 20111336 20111351 FOXP1 JASPAR yes 27216638
chr1 20111336 20111351 FOXP1 JASPAR yes 118243895
chr1 20111337 20111343 TBP TRANSFAC yes 27216639
chr1 20111337 20111343 TBP TRANSFAC yes 118243896
chr1 20111337 20111352 FOXP1 JASPAR yes 27216640
chr1 20111337 20111352 FOXP1 JASPAR yes 118243897
chr1 20111337 20111358 IRF1 JASPAR yes 27216641
chr1 20111337 20111358 IRF1 JASPAR yes 118243898
chr1 20111338 20111353 FOXP1 JASPAR yes 27216642
chr1 20111338 20111353 FOXP1 JASPAR yes 118243899
chr1 20111338 20111359 IRF1 JASPAR yes 27216643
chr1 20111338 20111359 IRF1 JASPAR yes 118243900
chr1 20111339 20111354 FOXP1 JASPAR yes 27216644
chr1 20111339 20111354 FOXP1 JASPAR yes 118243901
chr1 20111339 20111360 IRF1 JASPAR yes 27216645
chr1 20111339 20111360 IRF1 JASPAR yes 118243902
chr1 20111340 20111355 FOXP1 JASPAR yes 27216646
chr1 20111340 20111355 FOXP1 JASPAR yes 118243903
chr1 20111340 20111361 IRF1 JASPAR yes 27216647
chr1 20111340 20111361 IRF1 JASPAR yes 118243904
chr1 20111341 20111356 FOXP1 JASPAR yes 27216648
chr1 20111341 20111356 FOXP1 JASPAR yes 118243905
chr1 20111341 20111362 IRF1 JASPAR yes 27216649
chr1 20111341 20111362 IRF1 JASPAR yes 118243906
chr1 20111342 20111357 FOXP1 JASPAR yes 27216650
chr1 20111342 20111357 FOXP1 JASPAR yes 118243907
chr1 20111342 20111363 IRF1 JASPAR yes 27216651
chr1 20111342 20111363 IRF1 JASPAR yes 118243908
chr1 20111343 20111358 FOXP1 JASPAR yes 27216652
chr1 20111343 20111358 FOXP1 JASPAR yes 118243909
chr1 20111343 20111364 IRF1 JASPAR yes 27216653
chr1 20111343 20111364 IRF1 JASPAR yes 118243910
chr1 20111344 20111359 FOXP1 JASPAR yes 27216654
chr1 20111344 20111359 FOXP1 JASPAR yes 118243911
chr1 20111344 20111365 IRF1 JASPAR yes 27216655
chr1 20111344 20111365 IRF1 JASPAR yes 118243912
chr1 20111345 20111360 FOXP1 JASPAR yes 27216656
chr1 20111345 20111360 FOXP1 JASPAR yes 118243913
chr1 20111346 20111361 FOXP1 JASPAR yes 27216657
chr1 20111346 20111361 FOXP1 JASPAR yes 118243914
chr1 20111346 20111367 IRF1 JASPAR yes 27216658
chr1 20111346 20111367 IRF1 JASPAR yes 118243915
chr1 20111347 20111362 FOXP1 JASPAR yes 27216659
chr1 20111347 20111362 FOXP1 JASPAR yes 118243916
chr1 20111348 20111363 FOXP1 JASPAR yes 27216660
chr1 20111348 20111363 FOXP1 JASPAR yes 118243917
SNP sites on vista626[chr1:20111066-20111358]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20111250 rs115005016 A C,G
H1TF2 NFE SRF
134712
chr1 20111276 rs10626423 G GGAA no 134713
chr1 20111276 rs397778171 G GGAA no 134714
Genes possibly regulated by vista626[chr1:20111066-20111358]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20008706 20126438 - TMCO4 ENSG00000162542.9 20126438 0.68 1.0 267 84920
chr1 20140523 20141771 - RNF186 ENSG00000178828.5 20141771 0.97 0.0 268 69587
chr1 20209006 20239438 + OTUD3 ENSG00000169914.5 20209006 0.7 1.0 269 2352
Expression level of Genes
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miRNAs possibly regulated by vista626[chr1:20111066-20111358]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results