EnhancerDB
  1. Home
  2. Enhancers
  3. vista62840[chr9:110188118-110188260]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista62840[chr9:110188118-110188260]
Back to top
Tissue distribution of vista62840
Back to top
Transcription factor that possibly regulate vista62840[chr9:110188118-110188260]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr9 110188119 110188130 USF2 JASPAR yes 86028913
chr9 110188119 110188130 USF2 JASPAR yes 95392382
chr9 110188120 110188130 MAX JASPAR yes 86028914
chr9 110188120 110188130 MLX JASPAR yes 86028915
chr9 110188120 110188130 TFE3 JASPAR yes 86028916
chr9 110188120 110188130 TFEB JASPAR yes 86028917
chr9 110188120 110188130 TFEC JASPAR yes 86028918
chr9 110188120 110188130 MAX JASPAR yes 95392383
chr9 110188120 110188130 MLX JASPAR yes 95392384
chr9 110188120 110188130 TFE3 JASPAR yes 95392385
chr9 110188120 110188130 TFEB JASPAR yes 95392386
chr9 110188120 110188130 TFEC JASPAR yes 95392387
chr9 110188121 110188131 MAX JASPAR yes 86028919
chr9 110188121 110188131 MAX JASPAR yes 95392388
chr9 110188122 110188127 MYC TRANSFAC yes 86028920
chr9 110188122 110188127 USF1 TRANSFAC yes 86028921
chr9 110188122 110188127 USF2 TRANSFAC yes 86028922
chr9 110188122 110188127 MYC TRANSFAC yes 95392389
chr9 110188122 110188127 USF1 TRANSFAC yes 95392390
chr9 110188122 110188127 USF2 TRANSFAC yes 95392391
chr9 110188122 110188129 USF1 JASPAR yes 86028923
chr9 110188122 110188129 USF1 JASPAR yes 95392392
chr9 110188127 110188142 RUNX2 JASPAR yes 86028924
chr9 110188127 110188142 RUNX2 JASPAR yes 95392393
chr9 110188173 110188178 ETS2 TRANSFAC yes 86028925
chr9 110188173 110188178 ETS2 TRANSFAC yes 95392394
chr9 110188176 110188194 NR3C1 JASPAR yes 86028926
chr9 110188176 110188194 NR3C1 JASPAR yes 95392395
chr9 110188178 110188188 NFKB1 JASPAR yes 86028927
chr9 110188178 110188188 NFKB1 JASPAR yes 95392396
chr9 110188178 110188189 NFKB1 JASPAR yes 86028928
chr9 110188178 110188189 NFKB1 JASPAR yes 95392397
chr9 110188180 110188194 SPIC JASPAR yes 86028929
chr9 110188180 110188194 SPIC JASPAR yes 95392398
chr9 110188200 110188214 BATF3 JASPAR yes 86028930
chr9 110188200 110188214 BATF3 JASPAR yes 95392399
chr9 110188207 110188216 CDX1 JASPAR yes 86028931
chr9 110188207 110188216 CDX1 JASPAR yes 95392400
chr9 110188220 110188229 SOX9 JASPAR yes 86028932
chr9 110188220 110188229 SOX9 JASPAR yes 95392401
chr9 110188234 110188249 NR2C2 JASPAR yes 86028933
chr9 110188234 110188249 NR2C2 JASPAR yes 95392402
chr9 110188242 110188261 REST JASPAR yes 86028934
chr9 110188242 110188261 REST JASPAR yes 95392403
chr9 110188252 110188256 YY1 TRANSFAC yes 86028935
chr9 110188252 110188256 YY1 TRANSFAC yes 95392404
SNP sites on vista62840[chr9:110188118-110188260]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr9 110188197 rs10739244 A G no 11205374
chr9 110188212 rs560776219 T C
BATF3 CDX1
11205375
chr9 110188223 rs12348261 A T
SOX9
11205376
Genes possibly regulated by vista62840[chr9:110188118-110188260]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr9 110247133 110252763 - KLF4 ENSG00000136826.10 110252763 0.82 1.0 9203 35497
Expression level of Genes
Back to top
miRNAs possibly regulated by vista62840[chr9:110188118-110188260]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results