EnhancerDB
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  3. vista630[chr1:20334929-20335259]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista630[chr1:20334929-20335259]
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Tissue distribution of vista630
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Transcription factor that possibly regulate vista630[chr1:20334929-20335259]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20334995 20335011 RFX2 JASPAR yes 27227638
chr1 20334995 20335011 RFX3 JASPAR yes 27227639
chr1 20334995 20335011 RFX4 JASPAR yes 27227640
chr1 20334995 20335011 RFX5 JASPAR yes 27227641
chr1 20334995 20335011 RFX2 JASPAR yes 118244064
chr1 20334995 20335011 RFX3 JASPAR yes 118244065
chr1 20334995 20335011 RFX4 JASPAR yes 118244066
chr1 20334995 20335011 RFX5 JASPAR yes 118244067
chr1 20335019 20335022 MYB TRANSFAC yes 27227642
chr1 20335019 20335022 MYB TRANSFAC yes 118244068
chr1 20335019 20335030 RUNX1 JASPAR yes 27227643
chr1 20335019 20335030 RUNX1 JASPAR yes 118244069
chr1 20335020 20335030 MAX JASPAR yes 27227644
chr1 20335020 20335030 MAX JASPAR yes 118244070
chr1 20335023 20335035 POU2F1 JASPAR yes 27227645
chr1 20335023 20335035 POU2F1 JASPAR yes 118244071
chr1 20335023 20335036 POU3F3 JASPAR yes 27227646
chr1 20335023 20335036 POU3F3 JASPAR yes 118244072
chr1 20335023 20335037 POU1F1 JASPAR yes 27227647
chr1 20335023 20335037 POU1F1 JASPAR yes 118244073
chr1 20335024 20335036 POU3F1 JASPAR yes 27227648
chr1 20335024 20335036 POU3F2 JASPAR yes 27227649
chr1 20335024 20335036 POU3F1 JASPAR yes 118244074
chr1 20335024 20335036 POU3F2 JASPAR yes 118244075
chr1 20335024 20335037 POU2F2 JASPAR yes 27227650
chr1 20335024 20335037 POU2F2 JASPAR yes 118244076
chr1 20335025 20335034 POU5F1B JASPAR yes 27227651
chr1 20335025 20335034 POU5F1B JASPAR yes 118244077
chr1 20335028 20335045 ZNF410 JASPAR yes 27227652
chr1 20335028 20335045 ZNF410 JASPAR yes 118244078
chr1 20335041 20335049 RHOXF1 JASPAR yes 27227653
chr1 20335041 20335049 RHOXF1 JASPAR yes 118244079
chr1 20335054 20335069 STAT1 JASPAR yes 27227654
chr1 20335054 20335069 STAT1 JASPAR yes 118244080
chr1 20335056 20335067 STAT1 JASPAR yes 27227655
chr1 20335056 20335067 STAT3 JASPAR yes 27227656
chr1 20335056 20335067 STAT1 JASPAR yes 118244081
chr1 20335056 20335067 STAT3 JASPAR yes 118244082
chr1 20335057 20335065 STAT6 TRANSFAC yes 27227657
chr1 20335057 20335065 STAT6 TRANSFAC yes 118244083
chr1 20335074 20335077 MYB TRANSFAC yes 27227658
chr1 20335074 20335077 MYB TRANSFAC yes 118244084
chr1 20335074 20335087 ELF3 JASPAR yes 27227659
chr1 20335074 20335087 ELF3 JASPAR yes 118244085
chr1 20335078 20335088 RORA JASPAR yes 27227660
chr1 20335078 20335088 RORA JASPAR yes 118244086
chr1 20335081 20335087 ESR1 TRANSFAC yes 27227661
chr1 20335081 20335087 ESR1 TRANSFAC yes 118244087
chr1 20335083 20335087 ESR1 TRANSFAC yes 27227662
chr1 20335083 20335087 ESR1 TRANSFAC yes 118244088
chr1 20335087 20335106 RFX2 JASPAR yes 27227663
chr1 20335087 20335106 RFX2 JASPAR yes 118244089
chr1 20335091 20335107 RFX2 JASPAR yes 27227664
chr1 20335091 20335107 RFX3 JASPAR yes 27227665
chr1 20335091 20335107 RFX4 JASPAR yes 27227666
chr1 20335091 20335107 RFX5 JASPAR yes 27227667
chr1 20335091 20335107 RFX2 JASPAR yes 118244090
chr1 20335091 20335107 RFX3 JASPAR yes 118244091
chr1 20335091 20335107 RFX4 JASPAR yes 118244092
chr1 20335091 20335107 RFX5 JASPAR yes 118244093
chr1 20335112 20335115 MYB TRANSFAC yes 27227668
chr1 20335112 20335115 MYB TRANSFAC yes 118244094
chr1 20335115 20335128 ZBTB18 JASPAR yes 27227669
chr1 20335115 20335128 ZBTB18 JASPAR yes 118244095
chr1 20335117 20335127 FIGLA JASPAR yes 27227670
chr1 20335117 20335127 ID4 JASPAR yes 27227671
chr1 20335117 20335127 TCF3 JASPAR yes 27227672
chr1 20335117 20335127 TCF4 JASPAR yes 27227673
chr1 20335117 20335127 FIGLA JASPAR yes 118244096
chr1 20335117 20335127 ID4 JASPAR yes 118244097
chr1 20335117 20335127 TCF3 JASPAR yes 118244098
chr1 20335117 20335127 TCF4 JASPAR yes 118244099
chr1 20335119 20335138 RFX2 JASPAR yes 27227674
chr1 20335119 20335138 RFX2 JASPAR yes 118244100
chr1 20335121 20335136 RFX5 JASPAR yes 27227675
chr1 20335121 20335136 RFX5 JASPAR yes 118244101
chr1 20335123 20335139 RFX2 JASPAR yes 27227676
chr1 20335123 20335139 RFX3 JASPAR yes 27227677
chr1 20335123 20335139 RFX4 JASPAR yes 27227678
chr1 20335123 20335139 RFX5 JASPAR yes 27227679
chr1 20335123 20335139 RFX2 JASPAR yes 118244102
chr1 20335123 20335139 RFX3 JASPAR yes 118244103
chr1 20335123 20335139 RFX4 JASPAR yes 118244104
chr1 20335123 20335139 RFX5 JASPAR yes 118244105
chr1 20335124 20335143 RFX2 JASPAR yes 27227680
chr1 20335124 20335143 RFX2 JASPAR yes 118244106
chr1 20335135 20335153 ESR2 JASPAR yes 27227681
chr1 20335135 20335153 ESR2 JASPAR yes 118244107
chr1 20335144 20335155 NFE2L2 JASPAR yes 27227682
chr1 20335144 20335155 NFE2L2 JASPAR yes 118244108
chr1 20335146 20335162 SOX8 JASPAR yes 27227683
chr1 20335146 20335162 SOX8 JASPAR yes 118244109
chr1 20335160 20335166 ZNF354C JASPAR yes 27227684
chr1 20335160 20335166 ZNF354C JASPAR yes 118244110
chr1 20335164 20335180 ZNF143 JASPAR yes 27227685
chr1 20335164 20335180 ZNF143 JASPAR yes 118244111
chr1 20335170 20335181 STAT1 JASPAR yes 27227686
chr1 20335170 20335181 STAT3 JASPAR yes 27227687
chr1 20335170 20335181 STAT1 JASPAR yes 118244112
chr1 20335170 20335181 STAT3 JASPAR yes 118244113
chr1 20335175 20335180 ETS2 TRANSFAC yes 27227688
chr1 20335175 20335180 ETS2 TRANSFAC yes 118244114
chr1 20335192 20335208 SOX4 JASPAR yes 27227689
chr1 20335192 20335208 SOX4 JASPAR yes 118244115
chr1 20335233 20335248 HNF4A JASPAR yes 27227690
chr1 20335233 20335248 HNF4A JASPAR yes 118244116
chr1 20335234 20335248 NR2F1 JASPAR yes 27227691
chr1 20335234 20335248 NR2F1 JASPAR yes 118244117
chr1 20335234 20335249 HNF4G JASPAR yes 27227692
chr1 20335234 20335249 HNF4G JASPAR yes 118244118
SNP sites on vista630[chr1:20334929-20335259]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20334973 rs145861260 G A no 136214
chr1 20335111 rs577611329 G A no 136215
chr1 20335138 rs71647137 T C
ESR2 RFX2 RFX3 RFX4 RFX5
136216
chr1 20335168 rs530147295 T C
ZNF143
136217
Genes possibly regulated by vista630[chr1:20334929-20335259]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20246502 20250110 - PLA2G2E ENSG00000188784.4 20250110 0.0 0.0 270 15181
chr1 20301925 20306932 - PLA2G2A ENSG00000188257.6 20306932 0.97 1.0 271 72003
chr1 20354672 20417683 + PLA2G5 ENSG00000127472.6 20354672 0.95 1.0 272 80587
Expression level of Genes
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miRNAs possibly regulated by vista630[chr1:20334929-20335259]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results