EnhancerDB
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  3. vista63057[chr9:116285649-116286044]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista63057[chr9:116285649-116286044]
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Tissue distribution of vista63057
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Transcription factor that possibly regulate vista63057[chr9:116285649-116286044]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr9 116285564 116286141 RUNX3 UCSC Txn Factor no Conserved 108551580
chr9 116285652 116286278 NFIC UCSC Txn Factor no Conserved 108551581
chr9 116285652 116286278 NFIC UCSC Txn Factor no Conserved 108551582
chr9 116285671 116286006 EBF1 UCSC Txn Factor no Conserved 108551583
chr9 116285688 116285703 MEF2C JASPAR yes 86420879
chr9 116285688 116285703 MEF2C JASPAR yes 95403093
chr9 116285689 116285694 GATA2 JASPAR yes 86420880
chr9 116285689 116285694 GATA2 JASPAR yes 95403094
chr9 116285689 116285704 MEF2A JASPAR yes 86420881
chr9 116285689 116285704 MEF2A JASPAR yes 95403095
chr9 116285690 116285702 MEF2A JASPAR yes 86420882
chr9 116285690 116285702 MEF2B JASPAR yes 86420883
chr9 116285690 116285702 MEF2D JASPAR yes 86420884
chr9 116285690 116285702 MEF2A JASPAR yes 95403096
chr9 116285690 116285702 MEF2B JASPAR yes 95403097
chr9 116285690 116285702 MEF2D JASPAR yes 95403098
chr9 116285691 116285701 MEF2A JASPAR yes 86420885
chr9 116285691 116285701 MEF2A JASPAR yes 95403099
chr9 116285701 116285704 MYB TRANSFAC yes 86420886
chr9 116285701 116285704 MYB TRANSFAC yes 95403100
chr9 116285707 116285726 RFX2 JASPAR yes 86420887
chr9 116285707 116285726 RFX2 JASPAR yes 95403101
chr9 116285725 116285739 RORA JASPAR yes 86420888
chr9 116285725 116285739 RORA JASPAR yes 95403102
chr9 116285728 116285739 NFE2L2 JASPAR yes 86420889
chr9 116285728 116285739 NFE2L2 JASPAR yes 95403103
chr9 116285732 116285743 CDX2 JASPAR yes 86420890
chr9 116285732 116285743 CDX2 JASPAR yes 95403104
chr9 116285733 116285737 ESR1 TRANSFAC yes 86420891
chr9 116285733 116285737 ESR1 TRANSFAC yes 95403105
chr9 116285733 116285744 HOXC11 JASPAR yes 86420892
chr9 116285733 116285744 HOXD12 JASPAR yes 86420893
chr9 116285733 116285744 HOXC11 JASPAR yes 95403106
chr9 116285733 116285744 HOXD12 JASPAR yes 95403107
chr9 116285734 116285743 CDX1 JASPAR yes 86420894
chr9 116285734 116285743 CDX1 JASPAR yes 95403108
chr9 116285734 116285744 HOXC10 JASPAR yes 86420895
chr9 116285734 116285744 HOXC10 JASPAR yes 95403109
chr9 116285738 116285753 HNF4G JASPAR yes 86420896
chr9 116285738 116285753 HNF4G JASPAR yes 95403110
chr9 116285742 116285748 TCF4 TRANSFAC yes 86420897
chr9 116285742 116285748 TCF4 TRANSFAC yes 95403111
chr9 116285760 116285763 MYB TRANSFAC yes 86420898
chr9 116285760 116285763 MYB TRANSFAC yes 95403112
chr9 116285761 116285770 SNAI2 JASPAR yes 86420899
chr9 116285761 116285770 SNAI2 JASPAR yes 95403113
chr9 116285761 116285771 ID4 JASPAR yes 86420900
chr9 116285761 116285771 TCF3 JASPAR yes 86420901
chr9 116285761 116285771 TCF4 JASPAR yes 86420902
chr9 116285761 116285771 ID4 JASPAR yes 95403114
chr9 116285761 116285771 TCF3 JASPAR yes 95403115
chr9 116285761 116285771 TCF4 JASPAR yes 95403116
chr9 116285770 116285774 H1TF2 TRANSFAC yes 86420903
chr9 116285770 116285774 NFE TRANSFAC yes 86420904
chr9 116285770 116285774 SRF TRANSFAC yes 86420905
chr9 116285770 116285774 H1TF2 TRANSFAC yes 95403117
chr9 116285770 116285774 NFE TRANSFAC yes 95403118
chr9 116285770 116285774 SRF TRANSFAC yes 95403119
chr9 116285770 116285780 HOXA13 JASPAR yes 86420906
chr9 116285770 116285780 HOXB13 JASPAR yes 86420907
chr9 116285770 116285780 HOXD13 JASPAR yes 86420908
chr9 116285770 116285780 HOXA13 JASPAR yes 95403120
chr9 116285770 116285780 HOXB13 JASPAR yes 95403121
chr9 116285770 116285780 HOXD13 JASPAR yes 95403122
chr9 116285775 116285790 SCRT1 JASPAR yes 86420909
chr9 116285775 116285790 SCRT1 JASPAR yes 95403123
chr9 116285777 116285790 SCRT2 JASPAR yes 86420910
chr9 116285777 116285790 SCRT2 JASPAR yes 95403124
chr9 116285787 116285807 RREB1 JASPAR yes 86420911
chr9 116285787 116285807 RREB1 JASPAR yes 95403125
chr9 116285788 116285808 RREB1 JASPAR yes 86420912
chr9 116285788 116285808 RREB1 JASPAR yes 95403126
chr9 116285794 116285804 SREBF1 JASPAR yes 86420913
chr9 116285794 116285804 SREBF2 JASPAR yes 86420914
chr9 116285794 116285804 SREBF1 JASPAR yes 95403127
chr9 116285794 116285804 SREBF2 JASPAR yes 95403128
chr9 116285801 116285822 REST JASPAR yes 86420915
chr9 116285801 116285822 REST JASPAR yes 95403129
chr9 116285802 116285821 REST JASPAR yes 86420916
chr9 116285802 116285821 REST JASPAR yes 95403130
chr9 116285818 116285827 RUNX2 JASPAR yes 86420917
chr9 116285818 116285827 RUNX2 JASPAR yes 95403131
chr9 116285818 116285828 RUNX3 JASPAR yes 86420918
chr9 116285818 116285828 RUNX3 JASPAR yes 95403132
chr9 116285836 116285848 NHLH1 JASPAR yes 86420919
chr9 116285836 116285848 NHLH1 JASPAR yes 95403133
chr9 116285864 116285877 TFAP2A JASPAR yes 86420920
chr9 116285864 116285877 TFAP2B JASPAR yes 86420921
chr9 116285864 116285877 TFAP2C JASPAR yes 86420922
chr9 116285864 116285877 TFAP2A JASPAR yes 95403134
chr9 116285864 116285877 TFAP2B JASPAR yes 95403135
chr9 116285864 116285877 TFAP2C JASPAR yes 95403136
chr9 116285877 116285890 ZBTB18 JASPAR yes 86420923
chr9 116285877 116285890 ZBTB18 JASPAR yes 95403137
chr9 116285878 116285888 MAX JASPAR yes 86420924
chr9 116285878 116285888 MAX JASPAR yes 95403138
chr9 116285880 116285893 ZBTB18 JASPAR yes 86420925
chr9 116285880 116285893 ZBTB18 JASPAR yes 95403139
chr9 116285899 116285909 NFKB1 JASPAR yes 86420926
chr9 116285899 116285909 NFKB1 JASPAR yes 95403140
chr9 116285899 116285910 NFKB1 JASPAR yes 86420927
chr9 116285899 116285910 NFKB1 JASPAR yes 95403141
chr9 116285908 116285911 MYB TRANSFAC yes 86420928
chr9 116285908 116285911 MYB TRANSFAC yes 95403142
chr9 116285917 116285938 ZNF263 JASPAR yes 86420929
chr9 116285917 116285938 ZNF263 JASPAR yes 95403143
chr9 116285923 116285933 SP1 JASPAR yes 86420930
chr9 116285923 116285933 SP1 JASPAR yes 95403144
chr9 116285926 116285931 SP1 TRANSFAC yes 86420931
chr9 116285926 116285931 SP1 TRANSFAC yes 95403145
chr9 116285939 116285949 SP1 JASPAR yes 86420932
chr9 116285939 116285949 ZNF740 JASPAR yes 86420933
chr9 116285939 116285949 SP1 JASPAR yes 95403146
chr9 116285939 116285949 ZNF740 JASPAR yes 95403147
chr9 116285941 116285947 MAZ TRANSFAC yes 86420934
chr9 116285941 116285947 MAZ TRANSFAC yes 95403148
chr9 116285942 116285952 MZF1 JASPAR yes 86420935
chr9 116285942 116285952 MZF1 JASPAR yes 95403149
chr9 116285946 116285951 ETS2 TRANSFAC yes 86420936
chr9 116285946 116285951 ETS2 TRANSFAC yes 95403150
chr9 116285962 116285967 GATA1 TRANSFAC yes 86420937
chr9 116285962 116285967 GATA1 TRANSFAC yes 95403151
chr9 116285965 116285980 RUNX2 JASPAR yes 86420938
chr9 116285965 116285980 RUNX2 JASPAR yes 95403152
chr9 116285966 116285970 NFE TRANSFAC yes 86420939
chr9 116285966 116285970 NFE TRANSFAC yes 95403153
chr9 116285981 116285988 E2F1 TRANSFAC yes 86420940
chr9 116285981 116285988 E2F1 TRANSFAC yes 95403154
chr9 116285981 116285989 E2F1 JASPAR yes 86420941
chr9 116285981 116285989 E2F1 JASPAR yes 95403155
chr9 116285981 116285993 E2F1 JASPAR yes 86420942
chr9 116285981 116285993 E2F1 JASPAR yes 95403156
chr9 116286007 116286017 SP1 JASPAR yes 86420943
chr9 116286007 116286017 SP1 JASPAR yes 95403157
chr9 116286012 116286027 STAT2 JASPAR yes 86420944
chr9 116286012 116286027 STAT2 JASPAR yes 95403158
chr9 116286013 116286027 STAT1 JASPAR yes 86420945
chr9 116286013 116286027 STAT1 JASPAR yes 95403159
chr9 116286017 116286024 SPIB JASPAR yes 86420946
chr9 116286017 116286024 SPIB JASPAR yes 95403160
chr9 116286029 116286044 FOXP1 JASPAR yes 86420947
chr9 116286029 116286044 FOXP1 JASPAR yes 95403161
chr9 116286032 116286043 FOXP2 JASPAR yes 86420948
chr9 116286032 116286043 FOXP2 JASPAR yes 95403162
chr9 116286033 116286041 FOXO3 JASPAR yes 86420949
chr9 116286033 116286041 FOXO3 JASPAR yes 95403163
SNP sites on vista63057[chr9:116285649-116286044]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr9 116285831 rs117151434 G A,C
EBF1 NFIC RUNX3
11243599
chr9 116285869 rs532780385 G A
EBF1 NFIC RUNX3 TFAP2A TFAP2B TFAP2C
11243600
chr9 116285887 rs189747319 G A
EBF1 MAX NFIC RUNX3 ZBTB18
11243601
chr9 116285960 rs143713554 G A
EBF1 NFIC RUNX3
11243602
Genes possibly regulated by vista63057[chr9:116285649-116286044]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr9 116207011 116360018 + RGS3 ENSG00000138835.18 116207011 0.67 1.0 9253 21362
Expression level of Genes
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miRNAs possibly regulated by vista63057[chr9:116285649-116286044]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results