EnhancerDB
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  3. vista631[chr1:20358851-20359226]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista631[chr1:20358851-20359226]
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Tissue distribution of vista631
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Transcription factor that possibly regulate vista631[chr1:20358851-20359226]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20358879 20358883 NFE TRANSFAC yes 118244119
chr1 20358893 20358904 DMRT3 JASPAR yes 118244120
chr1 20358896 20358901 GATA1 TRANSFAC yes 118244121
chr1 20358897 20358912 MEF2A JASPAR yes 118244122
chr1 20358911 20358926 HSF1 JASPAR yes 118244123
chr1 20358912 20358925 HSF1 JASPAR yes 118244124
chr1 20358912 20358925 HSF4 JASPAR yes 118244125
chr1 20358915 20358931 SOX4 JASPAR yes 118244126
chr1 20358928 20358942 GLIS2 JASPAR yes 118244127
chr1 20358934 20358947 NR2F1 JASPAR yes 118244128
chr1 20358938 20358942 ESR1 TRANSFAC yes 118244129
chr1 20358938 20358949 USF1 JASPAR yes 118244130
chr1 20358939 20358949 TFE3 JASPAR yes 118244131
chr1 20358939 20358949 TFEB JASPAR yes 118244132
chr1 20358939 20358949 TFEC JASPAR yes 118244133
chr1 20358939 20358950 USF2 JASPAR yes 118244134
chr1 20358969 20358987 TP53 JASPAR yes 118244135
chr1 20358971 20358986 TP53 JASPAR yes 118244136
chr1 20358978 20358990 HES7 JASPAR yes 118244137
chr1 20358978 20358990 PKNOX1 JASPAR yes 118244138
chr1 20358978 20358990 PKNOX2 JASPAR yes 118244139
chr1 20358978 20358990 TGIF1 JASPAR yes 118244140
chr1 20358978 20358990 TGIF2 JASPAR yes 118244141
chr1 20358978 20358998 TP63 JASPAR yes 118244142
chr1 20358979 20358988 SNAI2 JASPAR yes 118244143
chr1 20358979 20358989 HEY2 JASPAR yes 118244144
chr1 20358979 20358989 ID4 JASPAR yes 118244145
chr1 20358979 20358989 TCF3 JASPAR yes 118244146
chr1 20358979 20358989 TCF4 JASPAR yes 118244147
chr1 20359004 20359009 TFAP2A TRANSFAC yes 118244148
chr1 20359004 20359010 MZF1 JASPAR yes 118244149
chr1 20359026 20359041 TFAP2A JASPAR yes 118244150
chr1 20359028 20359043 TFAP2C JASPAR yes 118244151
chr1 20359029 20359041 TFAP2A JASPAR yes 118244152
chr1 20359029 20359041 TFAP2B JASPAR yes 118244153
chr1 20359029 20359041 TFAP2C JASPAR yes 118244154
chr1 20359037 20359042 ETS2 TRANSFAC yes 118244155
chr1 20359045 20359060 HNF4G JASPAR yes 118244156
chr1 20359049 20359055 TCF4 TRANSFAC yes 118244157
chr1 20359055 20359075 TP53 JASPAR yes 118244158
chr1 20359082 20359087 NFY TRANSFAC yes 118244159
chr1 20359084 20359090 NFIC JASPAR yes 118244160
chr1 20359109 20359113 TEAD2 TRANSFAC yes 118244161
chr1 20359115 20359124 HIC2 JASPAR yes 118244162
chr1 20359115 20359125 NFIA JASPAR yes 118244163
chr1 20359116 20359130 PLAG1 JASPAR yes 118244164
chr1 20359117 20359123 NFIC JASPAR yes 118244165
chr1 20359120 20359136 GLIS1 JASPAR yes 118244166
chr1 20359125 20359132 SP1 TRANSFAC yes 118244167
chr1 20359127 20359132 SP1 TRANSFAC yes 118244168
chr1 20359131 20359141 HMBOX1 JASPAR yes 118244169
chr1 20359133 20359136 MYB TRANSFAC yes 118244170
chr1 20359138 20359150 POU2F1 JASPAR yes 118244171
chr1 20359139 20359152 POU2F2 JASPAR yes 118244172
chr1 20359143 20359155 YY1 JASPAR yes 118244173
chr1 20359148 20359163 FOXA1 JASPAR yes 118244174
chr1 20359151 20359162 FOXB1 JASPAR yes 118244175
chr1 20359151 20359166 FOXA1 JASPAR yes 118244176
chr1 20359152 20359163 FOXB1 JASPAR yes 118244177
chr1 20359161 20359167 TCF4 TRANSFAC yes 118244178
chr1 20359165 20359180 AR JASPAR yes 118244179
chr1 20359165 20359182 NR3C1 JASPAR yes 118244180
chr1 20359165 20359182 NR3C2 JASPAR yes 118244181
chr1 20359171 20359186 HSF1 JASPAR yes 118244182
chr1 20359172 20359185 HSF1 JASPAR yes 118244183
chr1 20359172 20359185 HSF2 JASPAR yes 118244184
chr1 20359172 20359185 HSF4 JASPAR yes 118244185
chr1 20359175 20359179 H4TF2 TRANSFAC yes 118244186
chr1 20359188 20359192 LFA1 TRANSFAC yes 118244187
chr1 20359196 20359207 PROP1 JASPAR yes 118244188
chr1 20359198 20359208 HOXA13 JASPAR yes 118244189
chr1 20359198 20359208 HOXB13 JASPAR yes 118244190
chr1 20359198 20359208 HOXC10 JASPAR yes 118244191
chr1 20359198 20359208 HOXD13 JASPAR yes 118244192
chr1 20359198 20359209 HOXA10 JASPAR yes 118244193
chr1 20359199 20359208 CDX1 JASPAR yes 118244194
chr1 20359199 20359209 MNX1 JASPAR yes 118244195
chr1 20359199 20359210 CDX2 JASPAR yes 118244196
chr1 20359205 20359216 RUNX1 JASPAR yes 118244197
SNP sites on vista631[chr1:20358851-20359226]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20359124 rs143021706 TA T
GLIS1 HIC2 NFIA PLAG1
136255
chr1 20359186 rs10799606 C T
HSF1
136256
chr1 20359196 rs553332029 A C
PROP1
136257
chr1 20359214 rs78435671 T A
RUNX1
136258
chr1 20359226 rs140101744 C G no 136259
Genes possibly regulated by vista631[chr1:20358851-20359226]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20301925 20306932 - PLA2G2A ENSG00000188257.6 20306932 0.97 1.0 271 48081
chr1 20354672 20417683 + PLA2G5 ENSG00000127472.6 20354672 0.95 1.0 272 95821
chr1 20438432 20446050 - PLA2G2D ENSG00000117215.10 20446050 0.97 0.96 273 13176
Expression level of Genes
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miRNAs possibly regulated by vista631[chr1:20358851-20359226]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results