EnhancerDB
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  3. vista632[chr1:20407516-20407737]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista632[chr1:20407516-20407737]
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Tissue distribution of vista632
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Transcription factor that possibly regulate vista632[chr1:20407516-20407737]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20407560 20407579 RFX2 JASPAR yes 27229286
chr1 20407560 20407579 RFX2 JASPAR yes 118244198
chr1 20407562 20407577 RFX5 JASPAR yes 27229287
chr1 20407562 20407577 RFX5 JASPAR yes 118244199
chr1 20407565 20407574 NFIX JASPAR yes 27229288
chr1 20407565 20407574 NFIX JASPAR yes 118244200
chr1 20407566 20407572 NFIC JASPAR yes 27229289
chr1 20407566 20407572 NFIC JASPAR yes 118244201
chr1 20407609 20407613 NFE TRANSFAC yes 27229290
chr1 20407609 20407613 NFE TRANSFAC yes 118244202
chr1 20407619 20407640 ZNF263 JASPAR yes 27229291
chr1 20407619 20407640 ZNF263 JASPAR yes 118244203
chr1 20407635 20407639 YY1 TRANSFAC yes 27229292
chr1 20407635 20407639 YY1 TRANSFAC yes 118244204
chr1 20407680 20407691 FLI1 JASPAR yes 27229293
chr1 20407680 20407691 FLI1 JASPAR yes 118244205
chr1 20407681 20407691 ETV6 JASPAR yes 27229294
chr1 20407681 20407691 ETV6 JASPAR yes 118244206
chr1 20407681 20407694 ELF1 JASPAR yes 27229295
chr1 20407681 20407694 ELF1 JASPAR yes 118244207
chr1 20407684 20407691 SPIB JASPAR yes 27229296
chr1 20407684 20407691 SPIB JASPAR yes 118244208
chr1 20407689 20407701 GLI2 JASPAR yes 27229297
chr1 20407689 20407701 ZBTB7C JASPAR yes 27229298
chr1 20407689 20407701 GLI2 JASPAR yes 118244209
chr1 20407689 20407701 ZBTB7C JASPAR yes 118244210
chr1 20407690 20407702 ZBTB7A JASPAR yes 27229299
chr1 20407690 20407702 ZBTB7A JASPAR yes 118244211
chr1 20407701 20407716 MEF2C JASPAR yes 27229300
chr1 20407701 20407716 MEF2C JASPAR yes 118244212
chr1 20407702 20407717 MEF2A JASPAR yes 27229301
chr1 20407702 20407717 MEF2A JASPAR yes 118244213
chr1 20407703 20407715 MEF2A JASPAR yes 27229302
chr1 20407703 20407715 MEF2B JASPAR yes 27229303
chr1 20407703 20407715 MEF2A JASPAR yes 118244214
chr1 20407703 20407715 MEF2B JASPAR yes 118244215
chr1 20407706 20407724 MAFF JASPAR yes 27229304
chr1 20407706 20407724 MAFF JASPAR yes 118244216
chr1 20407708 20407723 MAFK JASPAR yes 27229305
chr1 20407708 20407723 MAFK JASPAR yes 118244217
chr1 20407708 20407729 MAFG JASPAR yes 27229306
chr1 20407708 20407729 MAFG JASPAR yes 118244218
chr1 20407714 20407725 FOXH1 JASPAR yes 27229307
chr1 20407714 20407725 FOXH1 JASPAR yes 118244219
chr1 20407732 20407743 E2F1 JASPAR yes 27229308
chr1 20407732 20407743 E2F1 JASPAR yes 118244220
SNP sites on vista632[chr1:20407516-20407737]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20407582 rs11573244 C T no 136409
chr1 20407620 rs11573245 C T
ZNF263
136410
chr1 20407682 rs142795433 C T
ELF1 ETV6 FLI1
136411
Genes possibly regulated by vista632[chr1:20407516-20407737]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20354672 20417683 + PLA2G5 ENSG00000127472.6 20354672 0.95 1.0 272 47156
chr1 20438432 20446050 - PLA2G2D ENSG00000117215.10 20446050 0.97 0.96 273 61687
chr1 20465819 20476879 + PLA2G2F ENSG00000158786.4 20465819 0.97 1.0 274 41918
chr1 20487746 20503917 - PLA2G2C ENSG00000187980.6 20503917 0.97 0.98 275 3820
Expression level of Genes
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miRNAs possibly regulated by vista632[chr1:20407516-20407737]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results