EnhancerDB
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  3. vista634[chr1:20452500-20452937]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista634[chr1:20452500-20452937]
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Tissue distribution of vista634
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Transcription factor that possibly regulate vista634[chr1:20452500-20452937]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20452507 20452513 LEF1 TRANSFAC yes 118244258
chr1 20452507 20452513 TCF4 TRANSFAC yes 118244259
chr1 20452549 20452559 NFATC3 JASPAR yes 118244260
chr1 20452551 20452558 NFATC2 JASPAR yes 118244261
chr1 20452553 20452565 YY1 JASPAR yes 118244262
chr1 20452554 20452570 E2F2 JASPAR yes 118244263
chr1 20452556 20452571 NFYB JASPAR yes 118244264
chr1 20452563 20452567 H1TF2 TRANSFAC yes 118244265
chr1 20452563 20452567 NFE TRANSFAC yes 118244266
chr1 20452563 20452567 SRF TRANSFAC yes 118244267
chr1 20452583 20452602 RFX2 JASPAR yes 118244268
chr1 20452587 20452603 RFX2 JASPAR yes 118244269
chr1 20452587 20452603 RFX3 JASPAR yes 118244270
chr1 20452587 20452603 RFX4 JASPAR yes 118244271
chr1 20452587 20452603 RFX5 JASPAR yes 118244272
chr1 20452588 20452607 RFX2 JASPAR yes 118244273
chr1 20452609 20452622 SMAD2 JASPAR yes 118244274
chr1 20452614 20452624 MAX JASPAR yes 118244275
chr1 20452623 20452632 NKX3-2 JASPAR yes 118244276
chr1 20452629 20452633 ESR1 TRANSFAC yes 118244277
chr1 20452635 20452638 MYB TRANSFAC yes 118244278
chr1 20452640 20452646 PEA3 TRANSFAC yes 118244279
chr1 20452647 20452661 NR2F1 JASPAR yes 118244280
chr1 20452647 20452665 RARA JASPAR yes 118244281
chr1 20452648 20452662 NR2F1 JASPAR yes 118244282
chr1 20452668 20452680 INSM1 JASPAR yes 118244283
chr1 20452671 20452689 ESR2 JASPAR yes 118244284
chr1 20452673 20452693 ESR1 JASPAR yes 118244285
chr1 20452674 20452678 LFA1 TRANSFAC yes 118244286
chr1 20452676 20452694 ESR2 JASPAR yes 118244287
chr1 20452677 20452694 ESR1 JASPAR yes 118244288
chr1 20452677 20452695 ESR2 JASPAR yes 118244289
chr1 20452678 20452693 ESR2 JASPAR yes 118244290
chr1 20452678 20452698 ESR1 JASPAR yes 118244291
chr1 20452679 20452683 LFA1 TRANSFAC yes 118244292
chr1 20452687 20452704 RXRA JASPAR yes 118244293
chr1 20452688 20452707 REST JASPAR yes 118244294
chr1 20452735 20452741 SOX10 JASPAR yes 118244295
chr1 20452743 20452747 ESR1 TRANSFAC yes 118244296
chr1 20452743 20452754 USF1 JASPAR yes 118244297
chr1 20452743 20452754 USF2 JASPAR yes 118244298
chr1 20452754 20452764 ZNF740 JASPAR yes 118244299
chr1 20452756 20452769 NFKB1 JASPAR yes 118244300
chr1 20452756 20452769 NFKB2 JASPAR yes 118244301
chr1 20452757 20452767 RELA JASPAR yes 118244302
chr1 20452757 20452767 REL JASPAR yes 118244303
chr1 20452757 20452768 NFKB1 JASPAR yes 118244304
chr1 20452757 20452770 NFKB1 JASPAR yes 118244305
chr1 20452758 20452768 NFKB1 JASPAR yes 118244306
chr1 20452758 20452768 RELA JASPAR yes 118244307
chr1 20452758 20452769 NFKB1 JASPAR yes 118244308
chr1 20452775 20452794 CTCF JASPAR yes 118244309
chr1 20452801 20452805 YY1 TRANSFAC yes 118244310
chr1 20452805 20452815 REL JASPAR yes 118244311
chr1 20452810 20452816 MZF1 JASPAR yes 118244312
chr1 20452815 20452824 HIC2 JASPAR yes 118244313
chr1 20452821 20452836 HSF1 JASPAR yes 118244314
chr1 20452826 20452839 ZBTB18 JASPAR yes 118244315
chr1 20452828 20452840 TAL1 JASPAR yes 118244316
chr1 20452835 20452839 ESR1 TRANSFAC yes 118244317
chr1 20452838 20452842 YY1 TRANSFAC yes 118244318
chr1 20452839 20452850 STAT1 JASPAR yes 118244319
chr1 20452840 20452855 HSF1 JASPAR yes 118244320
chr1 20452841 20452854 HSF1 JASPAR yes 118244321
chr1 20452841 20452854 HSF2 JASPAR yes 118244322
chr1 20452841 20452854 HSF4 JASPAR yes 118244323
chr1 20452858 20452873 FOXP1 JASPAR yes 118244324
chr1 20452861 20452869 FOXO3 JASPAR yes 118244325
chr1 20452874 20452882 SP1 TRANSFAC yes 118244326
chr1 20452874 20452884 SP1 JASPAR yes 118244327
chr1 20452877 20452891 ZIC1 JASPAR yes 118244328
chr1 20452877 20452892 ZIC3 JASPAR yes 118244329
chr1 20452877 20452892 ZIC4 JASPAR yes 118244330
chr1 20452890 20452897 TBP TRANSFAC yes 118244331
chr1 20452890 20452897 TFIID TRANSFAC yes 118244332
chr1 20452900 20452913 ZBTB18 JASPAR yes 118244333
chr1 20452908 20452913 SP1 TRANSFAC yes 118244334
chr1 20452925 20452934 HIC2 JASPAR yes 118244335
chr1 20452928 20452932 LFA1 TRANSFAC yes 118244336
SNP sites on vista634[chr1:20452500-20452937]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20452614 rs11582251 C A,T
MAX SMAD2
136783
chr1 20452668 rs568663644 AG A
INSM1
136784
chr1 20452749 rs6681515 C G
USF1 USF2
136785
chr1 20452920 rs575852465 G A no 136786
Genes possibly regulated by vista634[chr1:20452500-20452937]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20354672 20417683 + PLA2G5 ENSG00000127472.6 20354672 0.95 1.0 272 2172
chr1 20438432 20446050 - PLA2G2D ENSG00000117215.10 20446050 0.97 0.96 273 93550
chr1 20465819 20476879 + PLA2G2F ENSG00000158786.4 20465819 0.97 1.0 274 87118
chr1 20487746 20503917 - PLA2G2C ENSG00000187980.6 20503917 0.97 0.98 275 49020
chr1 20512578 20522541 + UBXN10 ENSG00000162543.5 20512578 0.84 1.0 276 40359
Expression level of Genes
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miRNAs possibly regulated by vista634[chr1:20452500-20452937]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results