EnhancerDB
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  3. vista644[chr1:20924301-20924404]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista644[chr1:20924301-20924404]
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Tissue distribution of vista644
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Transcription factor that possibly regulate vista644[chr1:20924301-20924404]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20924309 20924324 STAT2 JASPAR yes 27254531
chr1 20924309 20924324 STAT2 JASPAR yes 118244584
chr1 20924310 20924325 FOXP1 JASPAR yes 27254532
chr1 20924310 20924325 FOXP1 JASPAR yes 118244585
chr1 20924333 20924337 YY1 TRANSFAC yes 27254533
chr1 20924333 20924337 YY1 TRANSFAC yes 118244586
chr1 20924353 20924357 LFA1 TRANSFAC yes 27254534
chr1 20924353 20924357 LFA1 TRANSFAC yes 118244587
chr1 20924361 20924382 IRF1 JASPAR yes 27254535
chr1 20924361 20924382 IRF1 JASPAR yes 118244588
chr1 20924363 20924368 ETS2 TRANSFAC yes 27254536
chr1 20924363 20924368 ETS2 TRANSFAC yes 118244589
chr1 20924364 20924378 SPI1 JASPAR yes 27254537
chr1 20924364 20924378 SPIC JASPAR yes 27254538
chr1 20924364 20924378 SPI1 JASPAR yes 118244590
chr1 20924364 20924378 SPIC JASPAR yes 118244591
chr1 20924365 20924373 EHF JASPAR yes 27254539
chr1 20924365 20924373 EHF JASPAR yes 118244592
chr1 20924367 20924372 ETS2 TRANSFAC yes 27254540
chr1 20924367 20924372 ETS2 TRANSFAC yes 118244593
chr1 20924370 20924385 FOXP1 JASPAR yes 27254541
chr1 20924370 20924385 FOXP1 JASPAR yes 118244594
chr1 20924372 20924387 FOXP1 JASPAR yes 27254542
chr1 20924372 20924387 FOXP1 JASPAR yes 118244595
chr1 20924375 20924385 HOXB13 JASPAR yes 27254543
chr1 20924375 20924385 HOXB13 JASPAR yes 118244596
chr1 20924375 20924390 FOXA1 JASPAR yes 27254544
chr1 20924375 20924390 FOXA1 JASPAR yes 118244597
chr1 20924377 20924389 FOXC2 JASPAR yes 27254545
chr1 20924377 20924389 FOXC2 JASPAR yes 118244598
chr1 20924377 20924390 POU2F2 JASPAR yes 27254546
chr1 20924377 20924390 POU2F2 JASPAR yes 118244599
chr1 20924379 20924383 YY1 TRANSFAC yes 27254547
chr1 20924379 20924383 YY1 TRANSFAC yes 118244600
chr1 20924381 20924402 IRF1 JASPAR yes 27254548
chr1 20924381 20924402 IRF1 JASPAR yes 118244601
chr1 20924385 20924400 FOXP1 JASPAR yes 27254549
chr1 20924385 20924400 FOXP1 JASPAR yes 118244602
chr1 20924386 20924401 FOXP1 JASPAR yes 27254550
chr1 20924386 20924401 FOXP1 JASPAR yes 118244603
chr1 20924387 20924402 FOXP1 JASPAR yes 27254551
chr1 20924387 20924402 FOXP1 JASPAR yes 118244604
chr1 20924388 20924403 FOXP1 JASPAR yes 27254552
chr1 20924388 20924403 FOXP1 JASPAR yes 118244605
chr1 20924389 20924404 FOXP1 JASPAR yes 27254553
chr1 20924389 20924404 FOXP1 JASPAR yes 118244606
chr1 20924390 20924405 FOXP1 JASPAR yes 27254554
chr1 20924390 20924405 FOXP1 JASPAR yes 118244607
chr1 20924403 20924416 HSF1 JASPAR yes 27254555
chr1 20924403 20924416 HSF2 JASPAR yes 27254556
chr1 20924403 20924416 HSF4 JASPAR yes 27254557
chr1 20924403 20924416 HSF1 JASPAR yes 118244608
chr1 20924403 20924416 HSF2 JASPAR yes 118244609
chr1 20924403 20924416 HSF4 JASPAR yes 118244610
SNP sites on vista644[chr1:20924301-20924404]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20924330 rs72649191 A G no 139465
chr1 20924387 rs201528723 C CT
FOXA1 FOXC2 FOXP1 IRF1 POU2F2
139466
chr1 20924387 rs553148757 C CT
FOXA1 FOXC2 FOXP1 IRF1 POU2F2
139467
Genes possibly regulated by vista644[chr1:20924301-20924404]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20825943 20834654 - MUL1 ENSG00000090432.5 20834654 0.57 1.0 279 10353
chr1 20878932 20881512 + FAM43B ENSG00000183114.6 20878932 0.98 0.93 280 54631
chr1 20915441 20945401 + CDA ENSG00000158825.5 20915441 0.91 1.0 281 91140
chr1 20959948 20978004 + PINK1 ENSG00000158828.5 20959948 0.73 1.0 282 64456
chr1 20978270 20988000 - DDOST ENSG00000244038.5 20988000 0.51 1.0 283 36404
Expression level of Genes
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miRNAs possibly regulated by vista644[chr1:20924301-20924404]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results