EnhancerDB
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  3. vista645[chr1:20930711-20931037]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista645[chr1:20930711-20931037]
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Tissue distribution of vista645
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Transcription factor that possibly regulate vista645[chr1:20930711-20931037]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 20930708 20930711 MYB TRANSFAC yes 27255554
chr1 20930708 20930711 MYB TRANSFAC yes 118244611
chr1 20930732 20930743 HOXC13 JASPAR yes 27255555
chr1 20930732 20930743 HOXC13 JASPAR yes 118244612
chr1 20930741 20930744 MYB TRANSFAC yes 27255556
chr1 20930741 20930744 MYB TRANSFAC yes 118244613
chr1 20930745 20930751 HiNF-A TRANSFAC yes 27255557
chr1 20930745 20930751 HiNF-A TRANSFAC yes 118244614
chr1 20930769 20930783 STAT1 JASPAR yes 27255558
chr1 20930769 20930783 STAT1 JASPAR yes 118244615
chr1 20930774 20930785 NFKB1 JASPAR yes 27255559
chr1 20930774 20930785 NFKB1 JASPAR yes 118244616
chr1 20930775 20930785 RELA JASPAR yes 27255560
chr1 20930775 20930785 REL JASPAR yes 27255561
chr1 20930775 20930785 RELA JASPAR yes 118244617
chr1 20930775 20930785 REL JASPAR yes 118244618
chr1 20930777 20930792 HNF4G JASPAR yes 118244619
chr1 20930778 20930792 NR2F1 JASPAR yes 118244620
chr1 20930778 20930793 HNF4A JASPAR yes 118244621
chr1 20930818 20930829 NFE2L2 JASPAR yes 118244622
chr1 20930819 20930830 FOS JASPAR yes 118244623
chr1 20930847 20930860 JUN JASPAR yes 118244624
chr1 20930867 20930871 LFA1 TRANSFAC yes 118244625
chr1 20930885 20930895 HOXA13 JASPAR yes 118244626
chr1 20930885 20930895 HOXB13 JASPAR yes 118244627
chr1 20930885 20930895 HOXD13 JASPAR yes 118244628
chr1 20930885 20930896 HOXC13 JASPAR yes 118244629
chr1 20930889 20930893 TEAD2 TRANSFAC yes 118244630
chr1 20930919 20930923 H4TF2 TRANSFAC yes 118244631
chr1 20930935 20930945 POU6F2 JASPAR yes 118244632
chr1 20930937 20930953 POU4F2 JASPAR yes 118244633
chr1 20930937 20930953 POU4F3 JASPAR yes 118244634
chr1 20930939 20930943 YY1 TRANSFAC yes 118244635
chr1 20930940 20930953 DUXA JASPAR yes 118244636
chr1 20930968 20930975 SPI1 JASPAR yes 118244637
chr1 20930998 20931003 H4TF1 TRANSFAC yes 118244638
chr1 20930998 20931009 CEBPB JASPAR yes 118244639
chr1 20930999 20931010 CEBPA JASPAR yes 118244640
SNP sites on vista645[chr1:20930711-20931037]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 20930716 rs142822490 A G no 139560
chr1 20930759 rs12024909 T C no 139561
chr1 20930907 rs181749961 C T no 139562
chr1 20930984 rs368415182 C T no 139563
chr1 20930987 rs185790240 T C no 139564
Genes possibly regulated by vista645[chr1:20930711-20931037]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 20825943 20834654 - MUL1 ENSG00000090432.5 20834654 0.57 1.0 279 3943
chr1 20878932 20881512 + FAM43B ENSG00000183114.6 20878932 0.98 0.93 280 48221
chr1 20915441 20945401 + CDA ENSG00000158825.5 20915441 0.91 1.0 281 84730
chr1 20959948 20978004 + PINK1 ENSG00000158828.5 20959948 0.73 1.0 282 71089
chr1 20978270 20988000 - DDOST ENSG00000244038.5 20988000 0.51 1.0 283 43037
Expression level of Genes
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miRNAs possibly regulated by vista645[chr1:20930711-20931037]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results