EnhancerDB
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  3. vista660[chr1:21555327-21555695]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista660[chr1:21555327-21555695]
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Tissue distribution of vista660
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Transcription factor that possibly regulate vista660[chr1:21555327-21555695]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 21555331 21555352 IRF1 JASPAR yes 27284994
chr1 21555331 21555352 IRF1 JASPAR yes 118245322
chr1 21555332 21555337 GATA1 TRANSFAC yes 27284995
chr1 21555332 21555337 GATA1 TRANSFAC yes 118245323
chr1 21555334 21555349 FOXP1 JASPAR yes 27284996
chr1 21555334 21555349 FOXP1 JASPAR yes 118245324
chr1 21555336 21555351 FOXP1 JASPAR yes 27284997
chr1 21555336 21555351 FOXP1 JASPAR yes 118245325
chr1 21555337 21555352 FOXP1 JASPAR yes 27284998
chr1 21555337 21555352 FOXP1 JASPAR yes 118245326
chr1 21555338 21555353 FOXP1 JASPAR yes 27284999
chr1 21555338 21555353 FOXP1 JASPAR yes 118245327
chr1 21555339 21555354 FOXP1 JASPAR yes 27285000
chr1 21555339 21555354 FOXP1 JASPAR yes 118245328
chr1 21555340 21555355 FOXP1 JASPAR yes 27285001
chr1 21555340 21555355 FOXP1 JASPAR yes 118245329
chr1 21555367 21555371 NFE TRANSFAC yes 27285002
chr1 21555367 21555371 NFE TRANSFAC yes 118245330
chr1 21555411 21555426 NR2C2 JASPAR yes 27285003
chr1 21555411 21555426 NR2C2 JASPAR yes 118245331
chr1 21555415 21555425 SP1 JASPAR yes 27285004
chr1 21555415 21555425 SP1 JASPAR yes 118245332
chr1 21555417 21555422 SP1 TRANSFAC yes 27285005
chr1 21555417 21555422 SP1 TRANSFAC yes 118245333
chr1 21555417 21555423 SP1 TRANSFAC yes 27285006
chr1 21555417 21555423 SP1 TRANSFAC yes 118245334
chr1 21555417 21555424 SP1 TRANSFAC yes 27285007
chr1 21555417 21555424 SP1 TRANSFAC yes 118245335
chr1 21555418 21555431 TFAP2A JASPAR yes 27285008
chr1 21555418 21555431 TFAP2B JASPAR yes 27285009
chr1 21555418 21555431 TFAP2C JASPAR yes 27285010
chr1 21555418 21555431 TFAP2A JASPAR yes 118245336
chr1 21555418 21555431 TFAP2B JASPAR yes 118245337
chr1 21555418 21555431 TFAP2C JASPAR yes 118245338
chr1 21555418 21555432 ZIC1 JASPAR yes 27285011
chr1 21555418 21555432 ZIC1 JASPAR yes 118245339
chr1 21555418 21555433 ZIC3 JASPAR yes 27285012
chr1 21555418 21555433 ZIC4 JASPAR yes 27285013
chr1 21555418 21555433 ZIC3 JASPAR yes 118245340
chr1 21555418 21555433 ZIC4 JASPAR yes 118245341
chr1 21555430 21555440 SREBF2 JASPAR yes 27285014
chr1 21555430 21555440 SREBF2 JASPAR yes 118245342
chr1 21555437 21555458 ZNF263 JASPAR yes 27285015
chr1 21555437 21555458 ZNF263 JASPAR yes 118245343
chr1 21555476 21555488 ZBTB7A JASPAR yes 27285016
chr1 21555476 21555488 ZBTB7A JASPAR yes 118245344
chr1 21555477 21555489 ZBTB7B JASPAR yes 27285017
chr1 21555477 21555489 ZBTB7C JASPAR yes 27285018
chr1 21555477 21555489 ZBTB7B JASPAR yes 118245345
chr1 21555477 21555489 ZBTB7C JASPAR yes 118245346
chr1 21555486 21555505 PAX5 JASPAR yes 27285019
chr1 21555486 21555505 PAX5 JASPAR yes 118245347
chr1 21555504 21555519 MEF2A JASPAR yes 27285020
chr1 21555504 21555519 MEF2A JASPAR yes 118245348
chr1 21555505 21555520 MEF2C JASPAR yes 27285021
chr1 21555505 21555520 MEF2C JASPAR yes 118245349
chr1 21555506 21555518 MEF2A JASPAR yes 27285022
chr1 21555506 21555518 MEF2B JASPAR yes 27285023
chr1 21555506 21555518 MEF2D JASPAR yes 27285024
chr1 21555506 21555518 MEF2A JASPAR yes 118245350
chr1 21555506 21555518 MEF2B JASPAR yes 118245351
chr1 21555506 21555518 MEF2D JASPAR yes 118245352
chr1 21555508 21555512 YY1 TRANSFAC yes 27285025
chr1 21555508 21555512 YY1 TRANSFAC yes 118245353
chr1 21555523 21555536 NFKB1 JASPAR yes 27285026
chr1 21555523 21555536 NFKB2 JASPAR yes 27285027
chr1 21555523 21555536 NFKB1 JASPAR yes 118245354
chr1 21555523 21555536 NFKB2 JASPAR yes 118245355
chr1 21555531 21555536 MYC TRANSFAC yes 27285028
chr1 21555531 21555536 MYC TRANSFAC yes 118245356
chr1 21555558 21555571 NR2F1 JASPAR yes 27285029
chr1 21555558 21555571 NR2F1 JASPAR yes 118245357
chr1 21555613 21555624 FOSL2 JASPAR yes 27285030
chr1 21555613 21555624 FOSL2 JASPAR yes 118245358
chr1 21555629 21555644 HNF1A JASPAR yes 27285031
chr1 21555629 21555644 HNF1A JASPAR yes 118245359
chr1 21555630 21555643 HNF1B JASPAR yes 27285032
chr1 21555630 21555643 HNF1B JASPAR yes 118245360
chr1 21555634 21555647 DUXA JASPAR yes 27285033
chr1 21555634 21555647 DUXA JASPAR yes 118245361
chr1 21555635 21555646 DUX4 JASPAR yes 27285034
chr1 21555635 21555646 DUX4 JASPAR yes 118245362
chr1 21555639 21555650 PHOX2A JASPAR yes 27285035
chr1 21555639 21555650 PROP1 JASPAR yes 27285036
chr1 21555639 21555650 PHOX2A JASPAR yes 118245363
chr1 21555639 21555650 PROP1 JASPAR yes 118245364
chr1 21555645 21555649 YY1 TRANSFAC yes 27285037
chr1 21555645 21555649 YY1 TRANSFAC yes 118245365
chr1 21555655 21555667 INSM1 JASPAR yes 27285038
chr1 21555655 21555667 INSM1 JASPAR yes 118245366
chr1 21555668 21555689 IRF1 JASPAR yes 27285039
chr1 21555668 21555689 IRF1 JASPAR yes 118245367
chr1 21555670 21555685 STAT2 JASPAR yes 27285040
chr1 21555670 21555685 STAT2 JASPAR yes 118245368
chr1 21555671 21555692 IRF1 JASPAR yes 27285041
chr1 21555671 21555692 IRF1 JASPAR yes 118245369
chr1 21555673 21555688 FOXP1 JASPAR yes 27285042
chr1 21555673 21555688 FOXP1 JASPAR yes 118245370
chr1 21555674 21555689 FOXP1 JASPAR yes 27285043
chr1 21555674 21555689 FOXP1 JASPAR yes 118245371
chr1 21555675 21555690 FOXP1 JASPAR yes 27285044
chr1 21555675 21555690 FOXP1 JASPAR yes 118245372
chr1 21555676 21555691 FOXP1 JASPAR yes 27285045
chr1 21555676 21555691 FOXP1 JASPAR yes 118245373
chr1 21555677 21555692 FOXP1 JASPAR yes 27285046
chr1 21555677 21555692 FOXP1 JASPAR yes 118245374
SNP sites on vista660[chr1:21555327-21555695]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 21555337 rs540408679 C CT
FOXP1 GATA1 IRF1
142114
chr1 21555479 rs113687227 C T
ZBTB7A ZBTB7B ZBTB7C
142115
chr1 21555507 rs557653715 T C
MEF2A MEF2B MEF2C MEF2D
142116
chr1 21555576 rs75969680 C T no 142117
chr1 21555586 rs139248375 G A no 142118
chr1 21555668 rs540990167 A G
IRF1
142119
Genes possibly regulated by vista660[chr1:21555327-21555695]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 21132963 21503377 - EIF4G3 ENSG00000075151.15 21503377 0.68 0.99 287 48050
Expression level of Genes
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miRNAs possibly regulated by vista660[chr1:21555327-21555695]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results