EnhancerDB
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  3. vista6878[chr10:27069899-27070563]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6878[chr10:27069899-27070563]
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Tissue distribution of vista6878
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Transcription factor that possibly regulate vista6878[chr10:27069899-27070563]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 27069968 27070368 FOS UCSC Txn Factor no Conserved 107905044
chr10 27070067 27070300 FOSL2 UCSC Txn Factor no Conserved 107905051
chr10 27069921 27069936 TFAP2C JASPAR yes 21064309
chr10 27069921 27069936 TFAP2C JASPAR yes 126161185
chr10 27069924 27069935 EBF1 JASPAR yes 21064310
chr10 27069924 27069935 EBF1 JASPAR yes 126161186
chr10 27069933 27069951 ESR1 JASPAR yes 21064311
chr10 27069933 27069951 ESR1 JASPAR yes 126161187
chr10 27069970 27069974 YY1 TRANSFAC yes 21064312
chr10 27069970 27069974 YY1 TRANSFAC yes 126161188
chr10 27069983 27069988 SP1 TRANSFAC yes 21064313
chr10 27069983 27069988 SP1 TRANSFAC yes 126161189
chr10 27069997 27070010 NR2F1 JASPAR yes 21064314
chr10 27069997 27070010 NR2F1 JASPAR yes 126161190
chr10 27070001 27070011 RORA JASPAR yes 21064315
chr10 27070001 27070011 RORA JASPAR yes 126161191
chr10 27070003 27070009 PTF TRANSFAC yes 21064316
chr10 27070003 27070009 PTF TRANSFAC yes 126161192
chr10 27070041 27070051 SMAD3 JASPAR yes 21064317
chr10 27070041 27070051 SMAD3 JASPAR yes 126161193
chr10 27070059 27070066 SPIB JASPAR yes 21064318
chr10 27070059 27070066 SPIB JASPAR yes 126161194
chr10 27070061 27070076 AR JASPAR yes 21064319
chr10 27070061 27070076 AR JASPAR yes 126161195
chr10 27070109 27070114 ATF1 TRANSFAC yes 21064320
chr10 27070109 27070114 ATF1 TRANSFAC yes 126161196
chr10 27070148 27070152 YY1 TRANSFAC yes 21064321
chr10 27070148 27070152 YY1 TRANSFAC yes 126161197
chr10 27070152 27070166 JUN JASPAR yes 21064322
chr10 27070152 27070166 JUN JASPAR yes 126161198
chr10 27070154 27070165 BATF JASPAR yes 21064323
chr10 27070154 27070165 BATF JASPAR yes 126161199
chr10 27070155 27070166 JUNB JASPAR yes 21064324
chr10 27070155 27070166 JUNB JASPAR yes 126161200
chr10 27070156 27070167 FOS JASPAR yes 21064325
chr10 27070156 27070167 FOSL1 JASPAR yes 21064326
chr10 27070156 27070167 NFE2 JASPAR yes 21064327
chr10 27070156 27070167 FOS JASPAR yes 126161201
chr10 27070156 27070167 FOSL1 JASPAR yes 126161202
chr10 27070156 27070167 NFE2 JASPAR yes 126161203
chr10 27070157 27070166 JDP2 JASPAR yes 21064328
chr10 27070157 27070166 JDP2 JASPAR yes 126161204
chr10 27070157 27070168 FOSL2 JASPAR yes 21064329
chr10 27070157 27070168 FOSL2 JASPAR yes 126161205
chr10 27070158 27070169 BATF JASPAR yes 21064330
chr10 27070158 27070169 BATF JASPAR yes 126161206
chr10 27070171 27070185 JUN JASPAR yes 21064331
chr10 27070171 27070185 JUN JASPAR yes 126161207
chr10 27070173 27070184 BATF JASPAR yes 21064332
chr10 27070173 27070184 BATF JASPAR yes 126161208
chr10 27070174 27070185 FOSL2 JASPAR yes 21064333
chr10 27070174 27070185 JUNB JASPAR yes 21064334
chr10 27070174 27070185 FOSL2 JASPAR yes 126161209
chr10 27070174 27070185 JUNB JASPAR yes 126161210
chr10 27070175 27070186 FOS JASPAR yes 21064335
chr10 27070175 27070186 FOSL1 JASPAR yes 21064336
chr10 27070175 27070186 JUND JASPAR yes 21064337
chr10 27070175 27070186 FOS JASPAR yes 126161211
chr10 27070175 27070186 FOSL1 JASPAR yes 126161212
chr10 27070175 27070186 JUND JASPAR yes 126161213
chr10 27070176 27070185 JDP2 JASPAR yes 21064338
chr10 27070176 27070185 JDP2 JASPAR yes 126161214
chr10 27070183 27070197 E2F7 JASPAR yes 21064339
chr10 27070183 27070197 E2F7 JASPAR yes 126161215
chr10 27070184 27070202 ESR1 JASPAR yes 21064340
chr10 27070184 27070202 ESR1 JASPAR yes 126161216
chr10 27070185 27070195 TBX21 JASPAR yes 21064341
chr10 27070185 27070195 TBX21 JASPAR yes 126161217
chr10 27070185 27070196 TBX20 JASPAR yes 21064342
chr10 27070185 27070196 TBX20 JASPAR yes 126161218
chr10 27070186 27070194 TBX15 JASPAR yes 21064343
chr10 27070186 27070194 TBX15 JASPAR yes 126161219
chr10 27070186 27070197 E2F6 JASPAR yes 21064344
chr10 27070186 27070197 E2F6 JASPAR yes 126161220
chr10 27070187 27070192 SP1 TRANSFAC yes 21064345
chr10 27070187 27070192 SP1 TRANSFAC yes 126161221
chr10 27070190 27070201 NFKB1 JASPAR yes 21064346
chr10 27070190 27070201 NFKB1 JASPAR yes 126161222
chr10 27070191 27070201 REL JASPAR yes 21064347
chr10 27070191 27070201 REL JASPAR yes 126161223
chr10 27070210 27070214 NFE TRANSFAC yes 21064348
chr10 27070210 27070214 NFE TRANSFAC yes 126161224
chr10 27070249 27070262 SMAD2 JASPAR yes 21064349
chr10 27070249 27070262 SMAD2 JASPAR yes 126161225
chr10 27070253 27070268 TFAP2A JASPAR yes 21064350
chr10 27070253 27070268 TFAP2C JASPAR yes 21064351
chr10 27070253 27070268 TFAP2A JASPAR yes 126161226
chr10 27070253 27070268 TFAP2C JASPAR yes 126161227
chr10 27070255 27070268 TFAP2A JASPAR yes 21064352
chr10 27070255 27070268 TFAP2B JASPAR yes 21064353
chr10 27070255 27070268 TFAP2C JASPAR yes 21064354
chr10 27070255 27070268 TFAP2A JASPAR yes 126161228
chr10 27070255 27070268 TFAP2B JASPAR yes 126161229
chr10 27070255 27070268 TFAP2C JASPAR yes 126161230
chr10 27070256 27070268 TFAP2A JASPAR yes 21064355
chr10 27070256 27070268 TFAP2B JASPAR yes 21064356
chr10 27070256 27070268 TFAP2C JASPAR yes 21064357
chr10 27070256 27070268 TFAP2A JASPAR yes 126161231
chr10 27070256 27070268 TFAP2B JASPAR yes 126161232
chr10 27070256 27070268 TFAP2C JASPAR yes 126161233
chr10 27070258 27070267 TFAP2A JASPAR yes 21064358
chr10 27070258 27070267 TFAP2A JASPAR yes 126161234
chr10 27070263 27070267 LFA1 TRANSFAC yes 21064359
chr10 27070263 27070267 LFA1 TRANSFAC yes 126161235
chr10 27070278 27070291 POU2F2 JASPAR yes 21064360
chr10 27070278 27070291 POU2F2 JASPAR yes 126161236
chr10 27070325 27070339 E2F7 JASPAR yes 21064361
chr10 27070325 27070339 E2F7 JASPAR yes 126161237
chr10 27070332 27070347 IRF9 JASPAR yes 21064362
chr10 27070332 27070347 IRF9 JASPAR yes 126161238
chr10 27070384 27070402 TP53 JASPAR yes 21064363
chr10 27070384 27070402 TP53 JASPAR yes 126161239
chr10 27070385 27070405 TP53 JASPAR yes 21064364
chr10 27070385 27070405 TP53 JASPAR yes 126161240
chr10 27070386 27070401 TP53 JASPAR yes 21064365
chr10 27070386 27070401 TP53 JASPAR yes 126161241
chr10 27070392 27070410 ESR1 JASPAR yes 21064366
chr10 27070392 27070410 ESR1 JASPAR yes 126161242
chr10 27070460 27070476 ZNF143 JASPAR yes 21064367
chr10 27070460 27070476 ZNF143 JASPAR yes 126161243
chr10 27070467 27070488 IRF1 JASPAR yes 21064368
chr10 27070467 27070488 IRF1 JASPAR yes 126161244
chr10 27070483 27070503 RREB1 JASPAR yes 21064369
chr10 27070483 27070503 RREB1 JASPAR yes 126161245
chr10 27070495 27070501 LEF1 TRANSFAC yes 21064370
chr10 27070495 27070501 SOX10 JASPAR yes 21064371
chr10 27070495 27070501 LEF1 TRANSFAC yes 126161246
chr10 27070495 27070501 SOX10 JASPAR yes 126161247
chr10 27070506 27070510 LFA1 TRANSFAC yes 21064372
chr10 27070506 27070510 LFA1 TRANSFAC yes 126161248
chr10 27070515 27070526 ESRRB JASPAR yes 21064373
chr10 27070515 27070526 ESRRB JASPAR yes 126161249
chr10 27070539 27070543 H1TF2 TRANSFAC yes 21064374
chr10 27070539 27070543 NFE TRANSFAC yes 21064375
chr10 27070539 27070543 SRF TRANSFAC yes 21064376
chr10 27070539 27070543 H1TF2 TRANSFAC yes 126161250
chr10 27070539 27070543 NFE TRANSFAC yes 126161251
chr10 27070539 27070543 SRF TRANSFAC yes 126161252
SNP sites on vista6878[chr10:27069899-27070563]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 27069902 rs10764641 G T no 1279006
chr10 27069950 rs532850927 C T
ESR1
1279007
chr10 27070158 rs549863252 AT A
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB NFE2
1279008
chr10 27070267 rs554422221 C T
FOS FOSL2 LFA1 TFAP2A TFAP2B TFAP2C
1279009
chr10 27070290 rs7907630 C T
FOS FOSL2 POU2F2
1279010
chr10 27070510 rs191961814 C A
LFA1
1279011
Genes possibly regulated by vista6878[chr10:27069899-27070563]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 26986588 27035727 + PDSS1 ENSG00000148459.11 26986588 0.83 0.99 9695 16689
chr10 27035522 27150016 - ABI1 ENSG00000136754.12 27150016 0.58 0.99 9696 20547
Expression level of Genes
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miRNAs possibly regulated by vista6878[chr10:27069899-27070563]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results