EnhancerDB
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  3. vista6879[chr10:27130056-27130389]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6879[chr10:27130056-27130389]
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Tissue distribution of vista6879
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Transcription factor that possibly regulate vista6879[chr10:27130056-27130389]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 27130044 27130056 TAL1 JASPAR yes 21064377
chr10 27130044 27130056 TAL1 JASPAR yes 126167064
chr10 27130055 27130061 TCF4 TRANSFAC yes 21064378
chr10 27130055 27130061 TCF4 TRANSFAC yes 126167065
chr10 27130062 27130076 POU4F1 JASPAR yes 21064379
chr10 27130062 27130076 POU4F1 JASPAR yes 126167066
chr10 27130067 27130079 FOXC2 JASPAR yes 21064380
chr10 27130067 27130079 FOXC2 JASPAR yes 126167067
chr10 27130068 27130079 FOXB1 JASPAR yes 21064381
chr10 27130068 27130079 FOXC1 JASPAR yes 21064382
chr10 27130068 27130079 FOXB1 JASPAR yes 126167068
chr10 27130068 27130079 FOXC1 JASPAR yes 126167069
chr10 27130069 27130073 YY1 TRANSFAC yes 21064383
chr10 27130069 27130073 YY1 TRANSFAC yes 126167070
chr10 27130075 27130079 NFE TRANSFAC yes 21064384
chr10 27130075 27130079 NFE TRANSFAC yes 126167071
chr10 27130075 27130080 GATA1 TRANSFAC yes 21064385
chr10 27130075 27130080 GATA1 TRANSFAC yes 126167072
chr10 27130075 27130081 GATA3 JASPAR yes 21064386
chr10 27130075 27130081 GATA3 JASPAR yes 126167073
chr10 27130084 27130099 STAT1 JASPAR yes 21064387
chr10 27130084 27130099 STAT1 JASPAR yes 126167074
chr10 27130086 27130097 STAT1 JASPAR yes 21064388
chr10 27130086 27130097 STAT1 JASPAR yes 126167075
chr10 27130088 27130099 ETV2 JASPAR yes 21064389
chr10 27130088 27130099 ETV2 JASPAR yes 126167076
chr10 27130089 27130099 ETS1 JASPAR yes 21064390
chr10 27130089 27130099 ETS1 JASPAR yes 126167077
chr10 27130095 27130105 FIGLA JASPAR yes 21064391
chr10 27130095 27130105 ID4 JASPAR yes 21064392
chr10 27130095 27130105 MSC JASPAR yes 21064393
chr10 27130095 27130105 TCF3 JASPAR yes 21064394
chr10 27130095 27130105 TCF4 JASPAR yes 21064395
chr10 27130095 27130105 FIGLA JASPAR yes 126167078
chr10 27130095 27130105 ID4 JASPAR yes 126167079
chr10 27130095 27130105 MSC JASPAR yes 126167080
chr10 27130095 27130105 TCF3 JASPAR yes 126167081
chr10 27130095 27130105 TCF4 JASPAR yes 126167082
chr10 27130096 27130105 SNAI2 JASPAR yes 21064396
chr10 27130096 27130105 SNAI2 JASPAR yes 126167083
chr10 27130096 27130116 TP63 JASPAR yes 21064397
chr10 27130096 27130116 TP63 JASPAR yes 126167084
chr10 27130097 27130102 USF2 TRANSFAC yes 21064398
chr10 27130097 27130102 USF2 TRANSFAC yes 126167085
chr10 27130146 27130157 NRL JASPAR yes 21064399
chr10 27130146 27130157 NRL JASPAR yes 126167086
chr10 27130191 27130195 YY1 TRANSFAC yes 21064400
chr10 27130191 27130195 YY1 TRANSFAC yes 126167087
chr10 27130192 27130213 IRF1 JASPAR yes 21064401
chr10 27130192 27130213 IRF1 JASPAR yes 126167088
chr10 27130196 27130200 YY1 TRANSFAC yes 21064402
chr10 27130196 27130200 YY1 TRANSFAC yes 126167089
chr10 27130196 27130210 IRF7 JASPAR yes 21064403
chr10 27130196 27130210 IRF7 JASPAR yes 126167090
chr10 27130201 27130205 YY1 TRANSFAC yes 21064404
chr10 27130201 27130205 YY1 TRANSFAC yes 126167091
chr10 27130203 27130218 MEF2A JASPAR yes 21064405
chr10 27130203 27130218 MEF2A JASPAR yes 126167092
chr10 27130208 27130219 PROP1 JASPAR yes 21064406
chr10 27130208 27130219 PROP1 JASPAR yes 126167093
chr10 27130211 27130226 SOX21 JASPAR yes 21064407
chr10 27130211 27130226 SOX21 JASPAR yes 126167094
chr10 27130215 27130225 HOXA13 JASPAR yes 21064408
chr10 27130215 27130225 HOXB13 JASPAR yes 21064409
chr10 27130215 27130225 HOXD13 JASPAR yes 21064410
chr10 27130215 27130225 HOXA13 JASPAR yes 126167095
chr10 27130215 27130225 HOXB13 JASPAR yes 126167096
chr10 27130215 27130225 HOXD13 JASPAR yes 126167097
chr10 27130215 27130226 HOXA10 JASPAR yes 21064411
chr10 27130215 27130226 HOXA10 JASPAR yes 126167098
chr10 27130216 27130225 CDX1 JASPAR yes 21064412
chr10 27130216 27130225 CDX1 JASPAR yes 126167099
chr10 27130216 27130227 CDX2 JASPAR yes 21064413
chr10 27130216 27130227 CDX2 JASPAR yes 126167100
chr10 27130224 27130239 MEF2A JASPAR yes 21064414
chr10 27130224 27130239 MEF2A JASPAR yes 126167101
chr10 27130228 27130232 YY1 TRANSFAC yes 21064415
chr10 27130228 27130232 YY1 TRANSFAC yes 126167102
chr10 27130246 27130263 ZNF410 JASPAR yes 21064416
chr10 27130246 27130263 ZNF410 JASPAR yes 126167103
chr10 27130272 27130284 YY1 JASPAR yes 21064417
chr10 27130272 27130284 YY1 JASPAR yes 126167104
chr10 27130293 27130303 NOTO JASPAR yes 21064418
chr10 27130293 27130303 NOTO JASPAR yes 126167105
chr10 27130294 27130308 POU1F1 JASPAR yes 21064419
chr10 27130294 27130308 POU1F1 JASPAR yes 126167106
chr10 27130295 27130307 POU3F1 JASPAR yes 21064420
chr10 27130295 27130307 POU3F2 JASPAR yes 21064421
chr10 27130295 27130307 POU3F1 JASPAR yes 126167107
chr10 27130295 27130307 POU3F2 JASPAR yes 126167108
chr10 27130295 27130308 POU3F3 JASPAR yes 21064422
chr10 27130295 27130308 POU3F3 JASPAR yes 126167109
chr10 27130296 27130308 POU2F1 JASPAR yes 21064423
chr10 27130296 27130308 POU2F1 JASPAR yes 126167110
chr10 27130297 27130306 POU3F4 JASPAR yes 21064424
chr10 27130297 27130306 POU5F1B JASPAR yes 21064425
chr10 27130297 27130306 POU3F4 JASPAR yes 126167111
chr10 27130297 27130306 POU5F1B JASPAR yes 126167112
chr10 27130299 27130302 MYB TRANSFAC yes 21064426
chr10 27130299 27130302 MYB TRANSFAC yes 126167113
chr10 27130318 27130328 HMBOX1 JASPAR yes 21064427
chr10 27130318 27130328 HMBOX1 JASPAR yes 126167114
chr10 27130320 27130334 STAT1 JASPAR yes 21064428
chr10 27130320 27130334 STAT1 JASPAR yes 126167115
chr10 27130322 27130343 IRF1 JASPAR yes 21064429
chr10 27130322 27130343 IRF1 JASPAR yes 126167116
chr10 27130323 27130344 IRF1 JASPAR yes 21064430
chr10 27130323 27130344 IRF1 JASPAR yes 126167117
chr10 27130326 27130341 FOXP1 JASPAR yes 21064431
chr10 27130326 27130341 FOXP1 JASPAR yes 126167118
chr10 27130327 27130342 FOXP1 JASPAR yes 21064432
chr10 27130327 27130342 FOXP1 JASPAR yes 126167119
chr10 27130328 27130343 FOXP1 JASPAR yes 21064433
chr10 27130328 27130343 FOXP1 JASPAR yes 126167120
chr10 27130328 27130348 RREB1 JASPAR yes 21064434
chr10 27130328 27130348 RREB1 JASPAR yes 126167121
chr10 27130328 27130349 IRF1 JASPAR yes 21064435
chr10 27130328 27130349 IRF1 JASPAR yes 126167122
chr10 27130329 27130344 FOXP1 JASPAR yes 21064436
chr10 27130329 27130344 FOXP1 JASPAR yes 126167123
chr10 27130330 27130345 FOXP1 JASPAR yes 21064437
chr10 27130330 27130345 FOXP1 JASPAR yes 126167124
chr10 27130331 27130346 FOXP1 JASPAR yes 21064438
chr10 27130331 27130346 FOXP1 JASPAR yes 126167125
chr10 27130333 27130353 RREB1 JASPAR yes 21064439
chr10 27130333 27130353 RREB1 JASPAR yes 126167126
chr10 27130334 27130349 MEF2C JASPAR yes 21064440
chr10 27130334 27130349 MEF2C JASPAR yes 126167127
chr10 27130334 27130355 IRF1 JASPAR yes 21064441
chr10 27130334 27130355 IRF1 JASPAR yes 126167128
chr10 27130335 27130350 RUNX2 JASPAR yes 21064442
chr10 27130335 27130350 RUNX2 JASPAR yes 126167129
chr10 27130338 27130358 RREB1 JASPAR yes 21064443
chr10 27130338 27130358 RREB1 JASPAR yes 126167130
chr10 27130348 27130363 RUNX2 JASPAR yes 21064444
chr10 27130348 27130363 RUNX2 JASPAR yes 126167131
chr10 27130381 27130385 YY1 TRANSFAC yes 21064445
chr10 27130381 27130385 YY1 TRANSFAC yes 126167132
chr10 27130381 27130398 BCL6B JASPAR yes 21064446
chr10 27130381 27130398 BCL6B JASPAR yes 126167133
SNP sites on vista6879[chr10:27130056-27130389]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 27130147 rs10829099 A T
NRL
1279454
chr10 27130220 rs184591095 T C
CDX1 CDX2 HOXA10 HOXA13 HOXB13 HOXD13 SOX21
1279455
chr10 27130328 rs200044010 CTTT C
FOXP1 HMBOX1 IRF1 RREB1 STAT1
1279456
chr10 27130364 rs10829100 G A no 1279457
Genes possibly regulated by vista6879[chr10:27130056-27130389]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 27035522 27150016 - ABI1 ENSG00000136754.12 27150016 0.58 0.99 9696 80373
Expression level of Genes
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miRNAs possibly regulated by vista6879[chr10:27130056-27130389]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results