EnhancerDB
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  3. vista6920[chr10:29280500-29280692]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6920[chr10:29280500-29280692]
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Tissue distribution of vista6920
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Transcription factor that possibly regulate vista6920[chr10:29280500-29280692]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 29280678 29281284 CTCF UCSC Txn Factor no Conserved 107905588
chr10 29280512 29280518 SOX10 JASPAR yes 21066294
chr10 29280512 29280518 SOX10 JASPAR yes 126282695
chr10 29280526 29280541 MEF2A JASPAR yes 21066295
chr10 29280526 29280541 MEF2A JASPAR yes 126282696
chr10 29280527 29280538 FOXB1 JASPAR yes 21066296
chr10 29280527 29280538 FOXC1 JASPAR yes 21066297
chr10 29280527 29280538 FOXB1 JASPAR yes 126282697
chr10 29280527 29280538 FOXC1 JASPAR yes 126282698
chr10 29280527 29280539 MEF2A JASPAR yes 21066298
chr10 29280527 29280539 MEF2B JASPAR yes 21066299
chr10 29280527 29280539 MEF2D JASPAR yes 21066300
chr10 29280527 29280539 MEF2A JASPAR yes 126282699
chr10 29280527 29280539 MEF2B JASPAR yes 126282700
chr10 29280527 29280539 MEF2D JASPAR yes 126282701
chr10 29280528 29280538 MEF2A JASPAR yes 21066301
chr10 29280528 29280538 MEF2A JASPAR yes 126282702
chr10 29280528 29280540 FOXI1 JASPAR yes 21066302
chr10 29280528 29280540 FOXI1 JASPAR yes 126282703
chr10 29280529 29280533 TEAD2 TRANSFAC yes 21066303
chr10 29280529 29280533 TEAD2 TRANSFAC yes 126282704
chr10 29280529 29280534 TBP TRANSFAC yes 21066304
chr10 29280529 29280534 TBP TRANSFAC yes 126282705
chr10 29280529 29280535 TMF TRANSFAC yes 21066305
chr10 29280529 29280535 TMF TRANSFAC yes 126282706
chr10 29280535 29280539 TEAD2 TRANSFAC yes 21066306
chr10 29280535 29280539 TEAD2 TRANSFAC yes 126282707
chr10 29280550 29280560 SP1 JASPAR yes 21066307
chr10 29280550 29280560 SP1 JASPAR yes 126282708
chr10 29280559 29280567 FOXO3 JASPAR yes 21066308
chr10 29280559 29280567 FOXO3 JASPAR yes 126282709
chr10 29280561 29280576 HSF1 JASPAR yes 21066309
chr10 29280561 29280576 HSF1 JASPAR yes 126282710
chr10 29280562 29280575 HSF1 JASPAR yes 21066310
chr10 29280562 29280575 HSF2 JASPAR yes 21066311
chr10 29280562 29280575 HSF4 JASPAR yes 21066312
chr10 29280562 29280575 HSF1 JASPAR yes 126282711
chr10 29280562 29280575 HSF2 JASPAR yes 126282712
chr10 29280562 29280575 HSF4 JASPAR yes 126282713
chr10 29280575 29280579 H1TF2 TRANSFAC yes 21066313
chr10 29280575 29280579 NFE TRANSFAC yes 21066314
chr10 29280575 29280579 SRF TRANSFAC yes 21066315
chr10 29280575 29280579 H1TF2 TRANSFAC yes 126282714
chr10 29280575 29280579 NFE TRANSFAC yes 126282715
chr10 29280575 29280579 SRF TRANSFAC yes 126282716
chr10 29280584 29280596 PKNOX1 JASPAR yes 21066316
chr10 29280584 29280596 PKNOX2 JASPAR yes 21066317
chr10 29280584 29280596 TGIF1 JASPAR yes 21066318
chr10 29280584 29280596 TGIF2 JASPAR yes 21066319
chr10 29280584 29280596 PKNOX1 JASPAR yes 126282717
chr10 29280584 29280596 PKNOX2 JASPAR yes 126282718
chr10 29280584 29280596 TGIF1 JASPAR yes 126282719
chr10 29280584 29280596 TGIF2 JASPAR yes 126282720
chr10 29280589 29280597 MEIS2 JASPAR yes 21066320
chr10 29280589 29280597 MEIS3 JASPAR yes 21066321
chr10 29280589 29280597 MEIS2 JASPAR yes 126282721
chr10 29280589 29280597 MEIS3 JASPAR yes 126282722
chr10 29280590 29280594 NFE TRANSFAC yes 21066322
chr10 29280590 29280594 NFE TRANSFAC yes 126282723
chr10 29280591 29280605 TCF7L2 JASPAR yes 21066323
chr10 29280591 29280605 TCF7L2 JASPAR yes 126282724
chr10 29280591 29280606 LEF1 JASPAR yes 21066324
chr10 29280591 29280606 LEF1 JASPAR yes 126282725
chr10 29280606 29280623 RARA JASPAR yes 21066325
chr10 29280606 29280623 RXRA JASPAR yes 21066326
chr10 29280606 29280623 RARA JASPAR yes 126282726
chr10 29280606 29280623 RXRA JASPAR yes 126282727
chr10 29280607 29280611 ESR1 TRANSFAC yes 21066327
chr10 29280607 29280611 ESR1 TRANSFAC yes 126282728
chr10 29280626 29280636 ZNF740 JASPAR yes 21066328
chr10 29280626 29280636 ZNF740 JASPAR yes 126282729
chr10 29280636 29280646 NFIA JASPAR yes 21066329
chr10 29280636 29280646 NFIA JASPAR yes 126282730
chr10 29280638 29280644 NFIC JASPAR yes 21066330
chr10 29280638 29280644 NFIC JASPAR yes 126282731
chr10 29280640 29280644 H1TF2 TRANSFAC yes 21066331
chr10 29280640 29280644 NFE TRANSFAC yes 21066332
chr10 29280640 29280644 SRF TRANSFAC yes 21066333
chr10 29280640 29280644 H1TF2 TRANSFAC yes 126282732
chr10 29280640 29280644 NFE TRANSFAC yes 126282733
chr10 29280640 29280644 SRF TRANSFAC yes 126282734
chr10 29280646 29280659 NFKB1 JASPAR yes 21066334
chr10 29280646 29280659 NFKB1 JASPAR yes 126282735
chr10 29280653 29280659 MZF1 JASPAR yes 21066335
chr10 29280653 29280659 MZF1 JASPAR yes 126282736
chr10 29280666 29280678 PBX1 JASPAR yes 21066336
chr10 29280666 29280678 PBX1 JASPAR yes 126282737
chr10 29280667 29280681 ONECUT3 JASPAR yes 21066337
chr10 29280667 29280681 ONECUT3 JASPAR yes 126282738
chr10 29280669 29280684 FOXP1 JASPAR yes 21066338
chr10 29280669 29280684 FOXP1 JASPAR yes 126282739
chr10 29280669 29280690 IRF1 JASPAR yes 21066339
chr10 29280669 29280690 IRF1 JASPAR yes 126282740
chr10 29280670 29280679 SRY JASPAR yes 21066340
chr10 29280670 29280679 SRY JASPAR yes 126282741
chr10 29280671 29280686 FOXP1 JASPAR yes 21066341
chr10 29280671 29280686 FOXP1 JASPAR yes 126282742
chr10 29280671 29280692 IRF1 JASPAR yes 21066342
chr10 29280671 29280692 IRF1 JASPAR yes 126282743
chr10 29280675 29280696 IRF1 JASPAR yes 21066343
chr10 29280675 29280696 IRF1 JASPAR yes 126282744
chr10 29280676 29280691 FOXP1 JASPAR yes 21066344
chr10 29280676 29280691 FOXP1 JASPAR yes 126282745
chr10 29280677 29280692 STAT2 JASPAR yes 21066345
chr10 29280677 29280692 STAT2 JASPAR yes 126282746
chr10 29280685 29280695 NFATC3 JASPAR yes 21066346
chr10 29280685 29280695 NFATC3 JASPAR yes 126282747
chr10 29280686 29280693 NFATC2 JASPAR yes 21066347
chr10 29280686 29280693 NFATC2 JASPAR yes 126282748
SNP sites on vista6920[chr10:29280500-29280692]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 29280592 rs1248418 T A,C,G
LEF1 MEIS2 MEIS3 NFE PKNOX1 PKNOX2 TCF7L2 TGIF1 TGIF2
1291480
chr10 29280623 rs112600856 G A
RARA RXRA
1291481
chr10 29280681 rs148900027 CT C
CTCF FOXP1 IRF1 ONECUT3 STAT2
1291482
chr10 29280681 rs960337255 CT C
CTCF FOXP1 IRF1 ONECUT3 STAT2
1291483
Genes possibly regulated by vista6920[chr10:29280500-29280692]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista6920[chr10:29280500-29280692]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results