EnhancerDB
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  3. vista6926[chr10:29493243-29493378]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6926[chr10:29493243-29493378]
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Tissue distribution of vista6926
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Transcription factor that possibly regulate vista6926[chr10:29493243-29493378]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 29493086 29493246 GATA2 UCSC Txn Factor no Conserved 107905787
chr10 29493234 29493246 PKNOX1 JASPAR yes 21066581
chr10 29493234 29493246 PKNOX2 JASPAR yes 21066582
chr10 29493234 29493246 TGIF1 JASPAR yes 21066583
chr10 29493234 29493246 PKNOX1 JASPAR yes 126301265
chr10 29493234 29493246 PKNOX2 JASPAR yes 126301266
chr10 29493234 29493246 TGIF1 JASPAR yes 126301267
chr10 29493251 29493272 IRF1 JASPAR yes 21066584
chr10 29493251 29493272 IRF1 JASPAR yes 126301268
chr10 29493253 29493268 PRDM1 JASPAR yes 21066585
chr10 29493253 29493268 PRDM1 JASPAR yes 126301269
chr10 29493259 29493274 PRDM1 JASPAR yes 21066586
chr10 29493259 29493274 PRDM1 JASPAR yes 126301270
chr10 29493262 29493272 GABPA JASPAR yes 21066587
chr10 29493262 29493272 GABPA JASPAR yes 126301271
chr10 29493265 29493270 ETS2 TRANSFAC yes 21066588
chr10 29493265 29493270 ETS2 TRANSFAC yes 126301272
chr10 29493265 29493279 TCF7L2 JASPAR yes 21066589
chr10 29493265 29493279 TCF7L2 JASPAR yes 126301273
chr10 29493280 29493291 E2F6 JASPAR yes 21066590
chr10 29493280 29493291 E2F6 JASPAR yes 126301274
chr10 29493281 29493302 ZNF263 JASPAR yes 21066591
chr10 29493281 29493302 ZNF263 JASPAR yes 126301275
chr10 29493295 29493310 HNF4A JASPAR yes 21066592
chr10 29493295 29493310 HNF4A JASPAR yes 126301276
chr10 29493300 29493306 SOX10 JASPAR yes 21066593
chr10 29493300 29493306 SOX10 JASPAR yes 126301277
chr10 29493304 29493315 EBF1 JASPAR yes 21066594
chr10 29493304 29493315 EBF1 JASPAR yes 126301278
chr10 29493305 29493316 EBF1 JASPAR yes 21066595
chr10 29493305 29493316 EBF1 JASPAR yes 126301279
chr10 29493311 29493323 TEAD1 JASPAR yes 21066596
chr10 29493311 29493323 TEAD1 JASPAR yes 126301280
chr10 29493312 29493319 SPIB JASPAR yes 21066597
chr10 29493312 29493319 SPIB JASPAR yes 126301281
chr10 29493313 29493323 TEAD1 JASPAR yes 21066598
chr10 29493313 29493323 TEAD4 JASPAR yes 21066599
chr10 29493313 29493323 TEAD1 JASPAR yes 126301282
chr10 29493313 29493323 TEAD4 JASPAR yes 126301283
chr10 29493314 29493322 TEAD3 JASPAR yes 21066600
chr10 29493314 29493322 TEAD3 JASPAR yes 126301284
chr10 29493316 29493337 ZNF263 JASPAR yes 21066601
chr10 29493316 29493337 ZNF263 JASPAR yes 126301285
chr10 29493319 29493330 FOXH1 JASPAR yes 21066602
chr10 29493319 29493330 FOXH1 JASPAR yes 126301286
chr10 29493325 29493335 ZNF740 JASPAR yes 21066603
chr10 29493325 29493335 ZNF740 JASPAR yes 126301287
chr10 29493327 29493337 SP1 JASPAR yes 21066604
chr10 29493327 29493337 SP1 JASPAR yes 126301288
chr10 29493330 29493335 SP1 TRANSFAC yes 21066605
chr10 29493330 29493335 SP1 TRANSFAC yes 126301289
chr10 29493334 29493338 LFA1 TRANSFAC yes 21066606
chr10 29493334 29493338 LFA1 TRANSFAC yes 126301290
chr10 29493365 29493376 NFKB1 JASPAR yes 21066607
chr10 29493365 29493376 NFKB1 JASPAR yes 126301291
chr10 29493366 29493371 ETS2 TRANSFAC yes 21066608
chr10 29493366 29493371 ETS2 TRANSFAC yes 126301292
chr10 29493366 29493376 RELA JASPAR yes 21066609
chr10 29493366 29493376 RELA JASPAR yes 126301293
SNP sites on vista6926[chr10:29493243-29493378]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 29493344 rs193199457 C T no 1293866
chr10 29493347 rs144855111 C CT no 1293867
chr10 29493371 rs11007464 A C,G
ETS2 NFKB1 RELA
1293868
Genes possibly regulated by vista6926[chr10:29493243-29493378]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 29577990 29607257 + LYZL1 ENSG00000120563.4 29577990 0.97 0.94 9709 15388
Expression level of Genes
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miRNAs possibly regulated by vista6926[chr10:29493243-29493378]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results