EnhancerDB
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  3. vista6952[chr10:29948331-29948643]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6952[chr10:29948331-29948643]
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Tissue distribution of vista6952
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Transcription factor that possibly regulate vista6952[chr10:29948331-29948643]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 29947872 29948576 TCF12 UCSC Txn Factor no Conserved 107905941
chr10 29947912 29948374 RELA UCSC Txn Factor no Conserved 107905944
chr10 29947990 29948421 GATA2 UCSC Txn Factor no Conserved 107905949
chr10 29948097 29948417 MAFK UCSC Txn Factor no Conserved 107905952
chr10 29948332 29948350 NR3C1 JASPAR yes 21067791
chr10 29948332 29948350 NR3C1 JASPAR yes 126336337
chr10 29948370 29948389 CTCF JASPAR yes 21067792
chr10 29948370 29948389 CTCF JASPAR yes 126336338
chr10 29948371 29948375 LFA1 TRANSFAC yes 21067793
chr10 29948371 29948375 LFA1 TRANSFAC yes 126336339
chr10 29948371 29948384 SCRT2 JASPAR yes 21067794
chr10 29948371 29948384 SCRT2 JASPAR yes 126336340
chr10 29948373 29948385 TAL1 JASPAR yes 21067795
chr10 29948373 29948385 TAL1 JASPAR yes 126336341
chr10 29948374 29948387 ZBTB18 JASPAR yes 21067796
chr10 29948374 29948387 ZBTB18 JASPAR yes 126336342
chr10 29948375 29948385 MSC JASPAR yes 21067797
chr10 29948375 29948385 MYF6 JASPAR yes 21067798
chr10 29948375 29948385 TFAP4 JASPAR yes 21067799
chr10 29948375 29948385 MSC JASPAR yes 126336343
chr10 29948375 29948385 MYF6 JASPAR yes 126336344
chr10 29948375 29948385 TFAP4 JASPAR yes 126336345
chr10 29948381 29948395 TLX1 JASPAR yes 21067800
chr10 29948381 29948395 TLX1 JASPAR yes 126336346
chr10 29948404 29948419 RUNX2 JASPAR yes 21067801
chr10 29948404 29948419 RUNX2 JASPAR yes 126336347
chr10 29948405 29948414 RUNX2 JASPAR yes 21067802
chr10 29948405 29948414 RUNX2 JASPAR yes 126336348
chr10 29948405 29948415 RUNX3 JASPAR yes 21067803
chr10 29948405 29948415 RUNX3 JASPAR yes 126336349
chr10 29948409 29948419 TFAP4 JASPAR yes 21067804
chr10 29948409 29948419 TFAP4 JASPAR yes 126336350
chr10 29948419 29948424 ETS2 TRANSFAC yes 21067805
chr10 29948419 29948424 ETS2 TRANSFAC yes 126336351
chr10 29948422 29948434 E2F1 JASPAR yes 21067806
chr10 29948422 29948434 E2F1 JASPAR yes 126336352
chr10 29948431 29948435 YY1 TRANSFAC yes 21067807
chr10 29948431 29948435 YY1 TRANSFAC yes 126336353
chr10 29948435 29948446 FOXB1 JASPAR yes 21067808
chr10 29948435 29948446 FOXC1 JASPAR yes 21067809
chr10 29948435 29948446 FOXB1 JASPAR yes 126336354
chr10 29948435 29948446 FOXC1 JASPAR yes 126336355
chr10 29948436 29948446 MEF2A JASPAR yes 21067810
chr10 29948436 29948446 MEF2A JASPAR yes 126336356
chr10 29948437 29948441 TEAD2 TRANSFAC yes 21067811
chr10 29948437 29948441 TEAD2 TRANSFAC yes 126336357
chr10 29948437 29948442 TBP TRANSFAC yes 21067812
chr10 29948437 29948442 TBP TRANSFAC yes 126336358
chr10 29948437 29948443 TMF TRANSFAC yes 21067813
chr10 29948437 29948443 TMF TRANSFAC yes 126336359
chr10 29948450 29948458 EHF JASPAR yes 21067814
chr10 29948450 29948458 EHF JASPAR yes 126336360
chr10 29948475 29948480 GATA2 JASPAR yes 21067815
chr10 29948475 29948480 GATA2 JASPAR yes 126336361
chr10 29948512 29948520 SP1 TRANSFAC yes 21067816
chr10 29948512 29948520 SP1 TRANSFAC yes 126336362
chr10 29948515 29948528 TFAP2A JASPAR yes 21067817
chr10 29948515 29948528 TFAP2B JASPAR yes 21067818
chr10 29948515 29948528 TFAP2C JASPAR yes 21067819
chr10 29948515 29948528 TFAP2A JASPAR yes 126336363
chr10 29948515 29948528 TFAP2B JASPAR yes 126336364
chr10 29948515 29948528 TFAP2C JASPAR yes 126336365
chr10 29948524 29948539 HSF1 JASPAR yes 21067820
chr10 29948524 29948539 HSF1 JASPAR yes 126336366
chr10 29948527 29948542 STAT1 JASPAR yes 21067821
chr10 29948527 29948542 STAT1 JASPAR yes 126336367
chr10 29948529 29948540 STAT1 JASPAR yes 21067822
chr10 29948529 29948540 STAT3 JASPAR yes 21067823
chr10 29948529 29948540 STAT1 JASPAR yes 126336368
chr10 29948529 29948540 STAT3 JASPAR yes 126336369
chr10 29948532 29948550 NR3C1 JASPAR yes 21067824
chr10 29948532 29948550 NR3C1 JASPAR yes 126336370
chr10 29948555 29948565 SP1 JASPAR yes 21067825
chr10 29948555 29948565 SP1 JASPAR yes 126336371
chr10 29948559 29948572 NR2F1 JASPAR yes 21067826
chr10 29948559 29948572 NR2F1 JASPAR yes 126336372
chr10 29948560 29948574 PLAG1 JASPAR yes 21067827
chr10 29948560 29948574 PLAG1 JASPAR yes 126336373
chr10 29948560 29948575 NR2C2 JASPAR yes 21067828
chr10 29948560 29948575 NR2C2 JASPAR yes 126336374
chr10 29948561 29948575 PLAG1 JASPAR yes 21067829
chr10 29948561 29948575 RXRB JASPAR yes 21067830
chr10 29948561 29948575 RXRG JASPAR yes 21067831
chr10 29948561 29948575 PLAG1 JASPAR yes 126336375
chr10 29948561 29948575 RXRB JASPAR yes 126336376
chr10 29948561 29948575 RXRG JASPAR yes 126336377
chr10 29948562 29948579 RARA JASPAR yes 21067832
chr10 29948562 29948579 RXRA JASPAR yes 21067833
chr10 29948562 29948579 RARA JASPAR yes 126336378
chr10 29948562 29948579 RXRA JASPAR yes 126336379
chr10 29948563 29948567 ESR1 TRANSFAC yes 21067834
chr10 29948563 29948567 ESR1 TRANSFAC yes 126336380
chr10 29948575 29948585 SREBF1 JASPAR yes 21067835
chr10 29948575 29948585 SREBF2 JASPAR yes 21067836
chr10 29948575 29948585 SREBF1 JASPAR yes 126336381
chr10 29948575 29948585 SREBF2 JASPAR yes 126336382
chr10 29948596 29948607 ESRRB JASPAR yes 21067837
chr10 29948596 29948607 ESRRB JASPAR yes 126336383
chr10 29948600 29948615 HNF1A JASPAR yes 21067838
chr10 29948600 29948615 HNF1A JASPAR yes 126336384
chr10 29948601 29948614 HNF1B JASPAR yes 21067839
chr10 29948601 29948614 HNF1B JASPAR yes 126336385
chr10 29948603 29948609 TBP TRANSFAC yes 21067840
chr10 29948603 29948609 TBP TRANSFAC yes 126336386
chr10 29948604 29948618 ONECUT2 JASPAR yes 21067841
chr10 29948604 29948618 ONECUT3 JASPAR yes 21067842
chr10 29948604 29948618 ONECUT2 JASPAR yes 126336387
chr10 29948604 29948618 ONECUT3 JASPAR yes 126336388
chr10 29948606 29948617 PROP1 JASPAR yes 21067843
chr10 29948606 29948617 PROP1 JASPAR yes 126336389
chr10 29948608 29948623 HNF1A JASPAR yes 21067844
chr10 29948608 29948623 HNF1A JASPAR yes 126336390
SNP sites on vista6952[chr10:29948331-29948643]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 29948455 rs1148219 A C
EHF TCF12
1297656
chr10 29948481 rs1148218 A G
TCF12
1297657
chr10 29948537 rs574872466 G GA
HSF1 NR3C1 STAT1 STAT3 TCF12
1297658
Genes possibly regulated by vista6952[chr10:29948331-29948643]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 29746267 30025710 - SVIL ENSG00000197321.10 30025710 0.9 0.99 9710 22933
Expression level of Genes
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miRNAs possibly regulated by vista6952[chr10:29948331-29948643]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results