EnhancerDB
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  3. vista6959[chr10:30040172-30040477]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6959[chr10:30040172-30040477]
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Tissue distribution of vista6959
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Transcription factor that possibly regulate vista6959[chr10:30040172-30040477]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 30040209 30040229 TBX19 JASPAR yes 21068142
chr10 30040209 30040229 TBX19 JASPAR yes 126346834
chr10 30040211 30040227 T JASPAR yes 21068143
chr10 30040211 30040227 T JASPAR yes 126346835
chr10 30040214 30040224 GCM2 JASPAR yes 21068144
chr10 30040214 30040224 GCM2 JASPAR yes 126346836
chr10 30040227 30040239 PROX1 JASPAR yes 21068145
chr10 30040227 30040239 PROX1 JASPAR yes 126346837
chr10 30040283 30040293 HMBOX1 JASPAR yes 21068146
chr10 30040283 30040293 HMBOX1 JASPAR yes 126346838
chr10 30040289 30040292 MYB TRANSFAC yes 21068147
chr10 30040289 30040292 MYB TRANSFAC yes 126346839
chr10 30040311 30040324 ELF3 JASPAR yes 21068148
chr10 30040311 30040324 ELF3 JASPAR yes 126346840
chr10 30040312 30040323 ELF5 JASPAR yes 21068149
chr10 30040312 30040323 ELF5 JASPAR yes 126346841
chr10 30040312 30040324 EHF JASPAR yes 21068150
chr10 30040312 30040324 ELF1 JASPAR yes 21068151
chr10 30040312 30040324 ELF4 JASPAR yes 21068152
chr10 30040312 30040324 EHF JASPAR yes 126346842
chr10 30040312 30040324 ELF1 JASPAR yes 126346843
chr10 30040312 30040324 ELF4 JASPAR yes 126346844
chr10 30040312 30040325 ELF1 JASPAR yes 21068153
chr10 30040312 30040325 ELF1 JASPAR yes 126346845
chr10 30040313 30040321 FEV JASPAR yes 21068154
chr10 30040313 30040321 FEV JASPAR yes 126346846
chr10 30040326 30040330 ESR1 TRANSFAC yes 21068155
chr10 30040326 30040330 ESR1 TRANSFAC yes 126346847
chr10 30040329 30040345 ZNF143 JASPAR yes 21068156
chr10 30040329 30040345 ZNF143 JASPAR yes 126346848
chr10 30040334 30040345 RUNX1 JASPAR yes 21068157
chr10 30040334 30040345 RUNX1 JASPAR yes 126346849
chr10 30040339 30040350 NFIL3 JASPAR yes 21068158
chr10 30040339 30040350 NFIL3 JASPAR yes 126346850
chr10 30040340 30040352 DBP JASPAR yes 21068159
chr10 30040340 30040352 HLF JASPAR yes 21068160
chr10 30040340 30040352 TEF JASPAR yes 21068161
chr10 30040340 30040352 DBP JASPAR yes 126346851
chr10 30040340 30040352 HLF JASPAR yes 126346852
chr10 30040340 30040352 TEF JASPAR yes 126346853
chr10 30040342 30040353 NFIL3 JASPAR yes 21068162
chr10 30040342 30040353 NFIL3 JASPAR yes 126346854
chr10 30040358 30040362 YY1 TRANSFAC yes 21068163
chr10 30040358 30040362 YY1 TRANSFAC yes 126346855
chr10 30040374 30040380 SOX10 JASPAR yes 21068164
chr10 30040374 30040380 SOX10 JASPAR yes 126346856
chr10 30040394 30040400 SOX10 JASPAR yes 21068165
chr10 30040394 30040400 SOX10 JASPAR yes 126346857
chr10 30040398 30040413 MEF2A JASPAR yes 21068166
chr10 30040398 30040413 MEF2A JASPAR yes 126346858
chr10 30040399 30040414 MEF2C JASPAR yes 21068167
chr10 30040399 30040414 MEF2C JASPAR yes 126346859
chr10 30040402 30040406 YY1 TRANSFAC yes 21068168
chr10 30040402 30040406 YY1 TRANSFAC yes 126346860
chr10 30040421 30040429 FOXL1 JASPAR yes 21068169
chr10 30040421 30040429 FOXL1 JASPAR yes 126346861
chr10 30040429 30040444 MEF2A JASPAR yes 21068170
chr10 30040429 30040444 MEF2A JASPAR yes 126346862
chr10 30040430 30040445 MEF2C JASPAR yes 21068171
chr10 30040430 30040445 MEF2C JASPAR yes 126346863
chr10 30040433 30040437 YY1 TRANSFAC yes 21068172
chr10 30040433 30040437 YY1 TRANSFAC yes 126346864
chr10 30040433 30040444 CEBPB JASPAR yes 21068173
chr10 30040433 30040444 CEBPB JASPAR yes 126346865
chr10 30040434 30040445 CEBPA JASPAR yes 21068174
chr10 30040434 30040445 CEBPA JASPAR yes 126346866
chr10 30040449 30040470 ZNF263 JASPAR yes 21068175
chr10 30040449 30040470 ZNF263 JASPAR yes 126346867
chr10 30040453 30040466 ELF1 JASPAR yes 21068176
chr10 30040453 30040466 ELF1 JASPAR yes 126346868
chr10 30040453 30040474 ZNF263 JASPAR yes 21068177
chr10 30040453 30040474 ZNF263 JASPAR yes 126346869
chr10 30040454 30040475 IRF1 JASPAR yes 21068178
chr10 30040454 30040475 IRF1 JASPAR yes 126346870
chr10 30040456 30040477 ZNF263 JASPAR yes 21068179
chr10 30040456 30040477 ZNF263 JASPAR yes 126346871
chr10 30040457 30040462 ETS2 TRANSFAC yes 21068180
chr10 30040457 30040462 ETS2 TRANSFAC yes 126346872
chr10 30040457 30040478 ZNF263 JASPAR yes 21068181
chr10 30040457 30040478 ZNF263 JASPAR yes 126346873
chr10 30040458 30040479 IRF1 JASPAR yes 21068182
chr10 30040458 30040479 IRF1 JASPAR yes 126346874
chr10 30040459 30040480 ZNF263 JASPAR yes 21068183
chr10 30040459 30040480 ZNF263 JASPAR yes 126346875
chr10 30040463 30040478 PRDM1 JASPAR yes 21068184
chr10 30040463 30040478 PRDM1 JASPAR yes 126346876
chr10 30040475 30040491 SOX4 JASPAR yes 21068185
chr10 30040475 30040491 SOX4 JASPAR yes 126346877
chr10 30040476 30040491 SOX21 JASPAR yes 21068186
chr10 30040476 30040491 SOX21 JASPAR yes 126346878
SNP sites on vista6959[chr10:30040172-30040477]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 30040188 rs139270841 G A,C no 1298761
chr10 30040227 rs142777674 A G
PROX1 T TBX19
1298762
chr10 30040260 rs550189408 G A no 1298763
chr10 30040380 rs570050555 G A
SOX10
1298764
chr10 30040416 rs76000507 G C no 1298765
Genes possibly regulated by vista6959[chr10:30040172-30040477]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 29746267 30025710 - SVIL ENSG00000197321.10 30025710 0.9 0.99 9710 85538
Expression level of Genes
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miRNAs possibly regulated by vista6959[chr10:30040172-30040477]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results