EnhancerDB
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  3. vista6968[chr10:30338036-30338318]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista6968[chr10:30338036-30338318]
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Tissue distribution of vista6968
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Transcription factor that possibly regulate vista6968[chr10:30338036-30338318]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr10 30338053 30338068 LEF1 JASPAR yes 21068629
chr10 30338054 30338068 TCF7L2 JASPAR yes 21068630
chr10 30338056 30338063 TCF4 TRANSFAC yes 21068631
chr10 30338057 30338063 LEF1 TRANSFAC yes 21068632
chr10 30338057 30338063 TCF4 TRANSFAC yes 21068633
chr10 30338063 30338069 GATA1 TRANSFAC yes 21068634
chr10 30338063 30338071 GATA5 JASPAR yes 21068635
chr10 30338080 30338085 NFY TRANSFAC yes 21068636
chr10 30338084 30338088 ESR1 TRANSFAC yes 21068637
chr10 30338092 30338097 GATA2 JASPAR yes 21068638
chr10 30338140 30338153 SMAD2 JASPAR yes 21068639
chr10 30338156 30338171 RUNX2 JASPAR yes 21068640
chr10 30338156 30338171 RUNX2 JASPAR yes 126373277
chr10 30338202 30338212 NKX2-3 JASPAR yes 21068641
chr10 30338202 30338212 NKX2-3 JASPAR yes 126373278
chr10 30338203 30338212 NKX2-8 JASPAR yes 21068642
chr10 30338203 30338212 NKX2-8 JASPAR yes 126373279
chr10 30338219 30338225 ETS1 JASPAR yes 21068643
chr10 30338219 30338225 ETS1 JASPAR yes 126373280
chr10 30338230 30338249 RFX2 JASPAR yes 21068644
chr10 30338230 30338249 RFX2 JASPAR yes 126373281
chr10 30338239 30338250 YY2 JASPAR yes 21068645
chr10 30338239 30338250 YY2 JASPAR yes 126373282
chr10 30338246 30338255 SOX9 JASPAR yes 21068646
chr10 30338246 30338255 SOX9 JASPAR yes 126373283
chr10 30338279 30338294 PRDM1 JASPAR yes 21068647
chr10 30338279 30338294 PRDM1 JASPAR yes 126373284
chr10 30338288 30338293 ETS2 TRANSFAC yes 21068648
chr10 30338288 30338293 ETS2 TRANSFAC yes 126373285
chr10 30338296 30338307 TFAP2A JASPAR yes 21068649
chr10 30338296 30338307 TFAP2B JASPAR yes 21068650
chr10 30338296 30338307 TFAP2C JASPAR yes 21068651
chr10 30338296 30338307 TFAP2A JASPAR yes 126373286
chr10 30338296 30338307 TFAP2B JASPAR yes 126373287
chr10 30338296 30338307 TFAP2C JASPAR yes 126373288
chr10 30338302 30338314 HES5 JASPAR yes 21068652
chr10 30338302 30338314 HES7 JASPAR yes 21068653
chr10 30338302 30338314 HES5 JASPAR yes 126373289
chr10 30338302 30338314 HES7 JASPAR yes 126373290
chr10 30338304 30338314 MAX JASPAR yes 21068654
chr10 30338304 30338314 MAX JASPAR yes 126373291
chr10 30338308 30338319 ELK4 JASPAR yes 21068655
chr10 30338308 30338319 FLI1 JASPAR yes 21068656
chr10 30338308 30338319 ELK4 JASPAR yes 126373292
chr10 30338308 30338319 FLI1 JASPAR yes 126373293
chr10 30338309 30338319 ERF JASPAR yes 21068657
chr10 30338309 30338319 ETS1 JASPAR yes 21068658
chr10 30338309 30338319 ERF JASPAR yes 126373294
chr10 30338309 30338319 ETS1 JASPAR yes 126373295
chr10 30338309 30338320 ETV2 JASPAR yes 21068659
chr10 30338309 30338320 ETV2 JASPAR yes 126373296
chr10 30338309 30338322 ELF1 JASPAR yes 21068660
chr10 30338309 30338322 ELF1 JASPAR yes 126373297
chr10 30338314 30338322 MEIS3 JASPAR yes 21068661
chr10 30338314 30338322 MEIS3 JASPAR yes 126373298
chr10 30338315 30338319 NFE TRANSFAC yes 21068662
chr10 30338315 30338319 NFE TRANSFAC yes 126373299
SNP sites on vista6968[chr10:30338036-30338318]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr10 30338210 rs7085817 C A
NKX2-3 NKX2-8
1301814
chr10 30338220 rs140993133 C T
ETS1
1301815
chr10 30338242 rs191399371 A G
RFX2 YY2
1301816
chr10 30338250 rs552963704 C G
SOX9 YY2
1301817
chr10 30338299 rs58214870 C T
TFAP2A TFAP2B TFAP2C
1301818
Genes possibly regulated by vista6968[chr10:30338036-30338318]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr10 30301729 30404423 - KIAA1462 ENSG00000165757.8 30404423 0.82 1.0 9711 33895
Expression level of Genes
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miRNAs possibly regulated by vista6968[chr10:30338036-30338318]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results