EnhancerDB
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  3. vista70[chr1:2232428-2232896]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista70[chr1:2232428-2232896]
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Tissue distribution of vista70
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Transcription factor that possibly regulate vista70[chr1:2232428-2232896]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 2232419 2232429 SREBF1 JASPAR yes 26233801
chr1 2232419 2232429 SREBF1 JASPAR yes 118216465
chr1 2232420 2232432 TFAP2A JASPAR yes 26233802
chr1 2232420 2232432 TFAP2B JASPAR yes 26233803
chr1 2232420 2232432 TFAP2C JASPAR yes 26233804
chr1 2232420 2232432 TFAP2A JASPAR yes 118216466
chr1 2232420 2232432 TFAP2B JASPAR yes 118216467
chr1 2232420 2232432 TFAP2C JASPAR yes 118216468
chr1 2232420 2232435 TFAP2A JASPAR yes 26233805
chr1 2232420 2232435 TFAP2C JASPAR yes 26233806
chr1 2232420 2232435 TFAP2A JASPAR yes 118216469
chr1 2232420 2232435 TFAP2C JASPAR yes 118216470
chr1 2232421 2232432 TFAP2A JASPAR yes 26233807
chr1 2232421 2232432 TFAP2B JASPAR yes 26233808
chr1 2232421 2232432 TFAP2C JASPAR yes 26233809
chr1 2232421 2232432 TFAP2A JASPAR yes 118216471
chr1 2232421 2232432 TFAP2B JASPAR yes 118216472
chr1 2232421 2232432 TFAP2C JASPAR yes 118216473
chr1 2232433 2232440 JUN TRANSFAC yes 26233810
chr1 2232433 2232440 JUN TRANSFAC yes 118216474
chr1 2232440 2232450 MZF1 JASPAR yes 26233811
chr1 2232440 2232450 MZF1 JASPAR yes 118216475
chr1 2232440 2232452 E2F8 JASPAR yes 26233812
chr1 2232440 2232452 E2F8 JASPAR yes 118216476
chr1 2232481 2232496 RUNX2 JASPAR yes 26233813
chr1 2232481 2232496 RUNX2 JASPAR yes 118216477
chr1 2232489 2232500 NFKB1 JASPAR yes 26233814
chr1 2232489 2232500 NFKB1 JASPAR yes 118216478
chr1 2232507 2232510 MYB TRANSFAC yes 26233815
chr1 2232507 2232510 MYB TRANSFAC yes 118216479
chr1 2232518 2232528 ETV6 JASPAR yes 26233816
chr1 2232518 2232528 ETV6 JASPAR yes 118216480
chr1 2232520 2232526 ETS1 JASPAR yes 26233817
chr1 2232520 2232526 ETS1 JASPAR yes 118216481
chr1 2232521 2232528 E2F1 TRANSFAC yes 26233818
chr1 2232521 2232528 E2F1 TRANSFAC yes 118216482
chr1 2232549 2232559 GABPA JASPAR yes 26233819
chr1 2232549 2232559 GABPA JASPAR yes 118216483
chr1 2232549 2232560 FLI1 JASPAR yes 26233820
chr1 2232549 2232560 FLI1 JASPAR yes 118216484
chr1 2232596 2232602 MAZ TRANSFAC yes 26233821
chr1 2232596 2232602 MAZ TRANSFAC yes 118216485
chr1 2232598 2232610 HINFP JASPAR yes 26233822
chr1 2232598 2232610 HINFP JASPAR yes 118216486
chr1 2232601 2232605 H4TF2 TRANSFAC yes 26233823
chr1 2232601 2232605 H4TF2 TRANSFAC yes 118216487
chr1 2232611 2232621 ELK1 JASPAR yes 26233824
chr1 2232611 2232621 ELK1 JASPAR yes 118216488
chr1 2232611 2232623 ELF4 JASPAR yes 26233825
chr1 2232611 2232623 ELF4 JASPAR yes 118216489
chr1 2232613 2232624 ELK4 JASPAR yes 26233826
chr1 2232613 2232624 ELK4 JASPAR yes 118216490
chr1 2232615 2232621 ETS1 JASPAR yes 26233827
chr1 2232615 2232621 SPI1 JASPAR yes 26233828
chr1 2232615 2232621 ETS1 JASPAR yes 118216491
chr1 2232615 2232621 SPI1 JASPAR yes 118216492
chr1 2232639 2232645 YY1 JASPAR yes 26233829
chr1 2232639 2232645 YY1 JASPAR yes 118216493
chr1 2232646 2232653 SP1 TRANSFAC yes 26233830
chr1 2232646 2232653 SP1 TRANSFAC yes 118216494
chr1 2232647 2232652 SP1 TRANSFAC yes 26233831
chr1 2232647 2232652 SP1 TRANSFAC yes 118216495
chr1 2232647 2232653 SP1 TRANSFAC yes 26233832
chr1 2232647 2232653 SP1 TRANSFAC yes 118216496
chr1 2232680 2232684 ESR1 TRANSFAC yes 26233833
chr1 2232680 2232684 ESR1 TRANSFAC yes 118216497
chr1 2232693 2232707 BATF3 JASPAR yes 26233834
chr1 2232693 2232707 BATF3 JASPAR yes 118216498
chr1 2232696 2232704 CREB1 JASPAR yes 26233835
chr1 2232696 2232704 CREB1 JASPAR yes 118216499
chr1 2232697 2232709 CREB1 JASPAR yes 26233836
chr1 2232697 2232709 CREB1 JASPAR yes 118216500
chr1 2232698 2232703 ATF1 TRANSFAC yes 26233837
chr1 2232698 2232703 ATF1 TRANSFAC yes 118216501
chr1 2232712 2232722 ETV6 JASPAR yes 26233838
chr1 2232712 2232722 ETV6 JASPAR yes 118216502
chr1 2232714 2232726 E2F8 JASPAR yes 26233839
chr1 2232714 2232726 E2F8 JASPAR yes 118216503
chr1 2232742 2232763 IRF1 JASPAR yes 26233840
chr1 2232742 2232763 IRF1 JASPAR yes 118216504
chr1 2232745 2232749 YY1 TRANSFAC yes 26233841
chr1 2232745 2232749 YY1 TRANSFAC yes 118216505
chr1 2232751 2232765 STAT1 JASPAR yes 26233842
chr1 2232751 2232765 STAT1 JASPAR yes 118216506
chr1 2232768 2232778 MSC JASPAR yes 26233843
chr1 2232768 2232778 MSC JASPAR yes 118216507
chr1 2232771 2232786 MEF2C JASPAR yes 26233844
chr1 2232771 2232786 SOX21 JASPAR yes 26233845
chr1 2232771 2232786 MEF2C JASPAR yes 118216508
chr1 2232771 2232786 SOX21 JASPAR yes 118216509
chr1 2232774 2232778 YY1 TRANSFAC yes 26233846
chr1 2232774 2232778 YY1 TRANSFAC yes 118216510
chr1 2232799 2232805 ZNF354C JASPAR yes 26233847
chr1 2232799 2232805 ZNF354C JASPAR yes 118216511
chr1 2232812 2232825 TFAP2A JASPAR yes 26233848
chr1 2232812 2232825 TFAP2B JASPAR yes 26233849
chr1 2232812 2232825 TFAP2C JASPAR yes 26233850
chr1 2232812 2232825 TFAP2A JASPAR yes 118216512
chr1 2232812 2232825 TFAP2B JASPAR yes 118216513
chr1 2232812 2232825 TFAP2C JASPAR yes 118216514
chr1 2232815 2232835 ESR1 JASPAR yes 26233851
chr1 2232815 2232835 ESR1 JASPAR yes 118216515
chr1 2232818 2232836 ESR2 JASPAR yes 26233852
chr1 2232818 2232836 ESR2 JASPAR yes 118216516
chr1 2232820 2232835 ESR2 JASPAR yes 26233853
chr1 2232820 2232835 ESR2 JASPAR yes 118216517
chr1 2232820 2232840 ESR1 JASPAR yes 26233854
chr1 2232820 2232840 ESR1 JASPAR yes 118216518
chr1 2232833 2232845 HINFP JASPAR yes 26233855
chr1 2232833 2232845 HINFP JASPAR yes 118216519
chr1 2232858 2232867 NKX3-2 JASPAR yes 26233856
chr1 2232858 2232867 NKX3-2 JASPAR yes 118216520
chr1 2232872 2232883 EBF1 JASPAR yes 26233857
chr1 2232872 2232883 EBF1 JASPAR yes 118216521
chr1 2232881 2232892 ESRRA JASPAR yes 26233858
chr1 2232881 2232892 ESRRA JASPAR yes 118216522
chr1 2232885 2232889 ESR1 TRANSFAC yes 26233859
chr1 2232885 2232889 ESR1 TRANSFAC yes 118216523
chr1 2232895 2232907 HES7 JASPAR yes 26233860
chr1 2232895 2232907 HES7 JASPAR yes 118216524
chr1 2232896 2232906 HEY2 JASPAR yes 26233861
chr1 2232896 2232906 ID4 JASPAR yes 26233862
chr1 2232896 2232906 TCF4 JASPAR yes 26233863
chr1 2232896 2232906 HEY2 JASPAR yes 118216525
chr1 2232896 2232906 ID4 JASPAR yes 118216526
chr1 2232896 2232906 TCF4 JASPAR yes 118216527
SNP sites on vista70[chr1:2232428-2232896]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 2232517 rs576834574 C A,T no 13065
chr1 2232526 rs113713853 G A,T
E2F1 ETS1 ETV6
13066
chr1 2232532 rs72643476 G A no 13067
chr1 2232537 rs115679718 A G no 13068
chr1 2232574 rs564383283 G A no 13069
chr1 2232662 rs375044817 C T no 13070
chr1 2232664 rs368152781 T C no 13071
chr1 2232681 rs187821975 G A
ESR1
13072
chr1 2232693 rs547481313 C T
BATF3
13073
chr1 2232700 rs570420978 C T
ATF1 BATF3 CREB1
13074
chr1 2232723 rs150897924 C T
E2F8
13075
chr1 2232810 rs193278285 G T no 13076
chr1 2232844 rs548744757 G A
HINFP
13077
Genes possibly regulated by vista70[chr1:2232428-2232896]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 2115903 2144159 - C1orf86 ENSG00000162585.12 2144159 0.73 1.0 58 11731
chr1 2143360 2145620 - AL590822.1 ENSG00000203301.2 2145620 0.82 0.87 60 13192
chr1 2160134 2241558 + SKI ENSG00000157933.9 2160134 0.71 1.0 61 27706
chr1 2252692 2323146 - MORN1 ENSG00000116151.9 2323146 0.8 1.0 62 9750
chr1 2258581 2259042 + AL589739.1 ENSG00000269753.1 2258581 0.9 0.98 63 74315
chr1 2323267 2336883 + RER1 ENSG00000157916.14 2323267 0.72 1.0 64 9629
Expression level of Genes
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miRNAs possibly regulated by vista70[chr1:2232428-2232896]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results