EnhancerDB
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  3. vista701[chr1:22266159-22266438]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista701[chr1:22266159-22266438]
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Tissue distribution of vista701
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Transcription factor that possibly regulate vista701[chr1:22266159-22266438]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 22266174 22266189 RFX5 JASPAR yes 27334635
chr1 22266174 22266189 RFX5 JASPAR yes 118247476
chr1 22266182 22266196 EBF1 JASPAR yes 27334636
chr1 22266182 22266196 EBF1 JASPAR yes 118247477
chr1 22266189 22266200 NFKB1 JASPAR yes 27334637
chr1 22266189 22266200 NFKB1 JASPAR yes 118247478
chr1 22266190 22266200 NFKB1 JASPAR yes 27334638
chr1 22266190 22266200 NFKB1 JASPAR yes 118247479
chr1 22266199 22266203 YY1 TRANSFAC yes 27334639
chr1 22266199 22266203 YY1 TRANSFAC yes 118247480
chr1 22266201 22266213 E2F8 JASPAR yes 27334640
chr1 22266201 22266213 E2F8 JASPAR yes 118247481
chr1 22266231 22266242 NFKB1 JASPAR yes 27334641
chr1 22266231 22266242 NFKB1 JASPAR yes 118247482
chr1 22266232 22266242 NFKB1 JASPAR yes 27334642
chr1 22266232 22266242 RELA JASPAR yes 27334643
chr1 22266232 22266242 REL JASPAR yes 27334644
chr1 22266232 22266242 NFKB1 JASPAR yes 118247483
chr1 22266232 22266242 RELA JASPAR yes 118247484
chr1 22266232 22266242 REL JASPAR yes 118247485
chr1 22266241 22266245 NFE TRANSFAC yes 27334645
chr1 22266241 22266245 NFE TRANSFAC yes 118247486
chr1 22266283 22266297 TLX1 JASPAR yes 27334646
chr1 22266283 22266297 TLX1 JASPAR yes 118247487
chr1 22266284 22266298 TLX1 JASPAR yes 27334647
chr1 22266284 22266298 TLX1 JASPAR yes 118247488
chr1 22266285 22266294 SNAI2 JASPAR yes 27334648
chr1 22266285 22266294 SNAI2 JASPAR yes 118247489
chr1 22266285 22266296 USF2 JASPAR yes 27334649
chr1 22266285 22266296 USF2 JASPAR yes 118247490
chr1 22266296 22266309 TFAP2A JASPAR yes 27334650
chr1 22266296 22266309 TFAP2B JASPAR yes 27334651
chr1 22266296 22266309 TFAP2A JASPAR yes 118247491
chr1 22266296 22266309 TFAP2B JASPAR yes 118247492
chr1 22266312 22266322 NFATC3 JASPAR yes 27334652
chr1 22266312 22266322 NFATC3 JASPAR yes 118247493
chr1 22266313 22266320 NFATC2 JASPAR yes 27334653
chr1 22266313 22266320 NFATC2 JASPAR yes 118247494
chr1 22266326 22266345 REST JASPAR yes 27334654
chr1 22266326 22266345 REST JASPAR yes 118247495
chr1 22266329 22266333 NFE TRANSFAC yes 27334655
chr1 22266329 22266333 NFE TRANSFAC yes 118247496
chr1 22266364 22266368 YY1 TRANSFAC yes 27334656
chr1 22266364 22266368 YY1 TRANSFAC yes 118247497
chr1 22266381 22266395 STAT1 JASPAR yes 27334657
chr1 22266381 22266395 STAT1 JASPAR yes 118247498
chr1 22266409 22266416 NKX3-1 JASPAR yes 27334658
chr1 22266409 22266416 NKX3-1 JASPAR yes 118247499
chr1 22266420 22266432 IRF1 JASPAR yes 27334659
chr1 22266420 22266432 IRF1 JASPAR yes 118247500
SNP sites on vista701[chr1:22266159-22266438]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 22266330 rs115979533 C G
NFE REST
147727
Genes possibly regulated by vista701[chr1:22266159-22266438]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 22148738 22263790 - HSPG2 ENSG00000142798.12 22263790 0.84 1.0 294 97631
chr1 22303514 22325135 + CELA3B ENSG00000219073.3 22303514 1.0 0.84 295 62924
chr1 22328149 22339032 + CELA3A ENSG00000142789.15 22328149 1.0 0.97 296 38289
Expression level of Genes
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miRNAs possibly regulated by vista701[chr1:22266159-22266438]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results