EnhancerDB
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  3. vista720[chr1:23003504-23003620]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista720[chr1:23003504-23003620]
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Tissue distribution of vista720
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Transcription factor that possibly regulate vista720[chr1:23003504-23003620]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 23003495 23003507 PKNOX1 JASPAR yes 27382099
chr1 23003495 23003507 PKNOX2 JASPAR yes 27382100
chr1 23003495 23003507 TGIF1 JASPAR yes 27382101
chr1 23003495 23003507 TGIF2 JASPAR yes 27382102
chr1 23003495 23003507 PKNOX1 JASPAR yes 118248385
chr1 23003495 23003507 PKNOX2 JASPAR yes 118248386
chr1 23003495 23003507 TGIF1 JASPAR yes 118248387
chr1 23003495 23003507 TGIF2 JASPAR yes 118248388
chr1 23003496 23003506 TFAP4 JASPAR yes 27382103
chr1 23003496 23003506 TFAP4 JASPAR yes 118248389
chr1 23003500 23003513 NR2F1 JASPAR yes 27382104
chr1 23003500 23003513 NR2F1 JASPAR yes 118248390
chr1 23003504 23003518 NR2F1 JASPAR yes 27382105
chr1 23003504 23003518 NR2F1 JASPAR yes 118248391
chr1 23003504 23003519 NR2C2 JASPAR yes 27382106
chr1 23003504 23003519 NR2C2 JASPAR yes 118248392
chr1 23003514 23003525 EBF1 JASPAR yes 27382107
chr1 23003514 23003525 EBF1 JASPAR yes 118248393
chr1 23003522 23003527 SP1 TRANSFAC yes 27382108
chr1 23003522 23003527 SP1 TRANSFAC yes 118248394
chr1 23003538 23003553 RUNX2 JASPAR yes 27382109
chr1 23003538 23003553 RUNX2 JASPAR yes 118248395
chr1 23003541 23003547 SOX10 JASPAR yes 27382110
chr1 23003541 23003547 SOX10 JASPAR yes 118248396
chr1 23003541 23003553 GLI2 JASPAR yes 27382111
chr1 23003541 23003553 GLI2 JASPAR yes 118248397
chr1 23003542 23003552 RUNX3 JASPAR yes 27382112
chr1 23003542 23003552 RUNX3 JASPAR yes 118248398
chr1 23003543 23003552 RUNX2 JASPAR yes 27382113
chr1 23003543 23003552 RUNX2 JASPAR yes 118248399
chr1 23003560 23003574 PLAG1 JASPAR yes 27382114
chr1 23003560 23003574 PLAG1 JASPAR yes 118248400
chr1 23003562 23003574 TFAP2A JASPAR yes 27382115
chr1 23003562 23003574 TFAP2B JASPAR yes 27382116
chr1 23003562 23003574 TFAP2C JASPAR yes 27382117
chr1 23003562 23003574 TFAP2A JASPAR yes 118248401
chr1 23003562 23003574 TFAP2B JASPAR yes 118248402
chr1 23003562 23003574 TFAP2C JASPAR yes 118248403
chr1 23003562 23003577 TFAP2A JASPAR yes 27382118
chr1 23003562 23003577 TFAP2C JASPAR yes 27382119
chr1 23003562 23003577 TFAP2A JASPAR yes 118248404
chr1 23003562 23003577 TFAP2C JASPAR yes 118248405
chr1 23003579 23003585 SOX10 JASPAR yes 27382120
chr1 23003579 23003585 SOX10 JASPAR yes 118248406
chr1 23003584 23003595 E2F6 JASPAR yes 27382121
chr1 23003584 23003595 E2F6 JASPAR yes 118248407
chr1 23003585 23003590 SP1 TRANSFAC yes 27382122
chr1 23003585 23003590 SP1 TRANSFAC yes 118248408
chr1 23003588 23003593 ETS2 TRANSFAC yes 27382123
chr1 23003588 23003593 ETS2 TRANSFAC yes 118248409
chr1 23003592 23003610 E2F3 JASPAR yes 27382124
chr1 23003592 23003610 E2F3 JASPAR yes 118248410
chr1 23003602 23003606 H1TF2 TRANSFAC yes 27382125
chr1 23003602 23003606 NFE TRANSFAC yes 27382126
chr1 23003602 23003606 SRF TRANSFAC yes 27382127
chr1 23003602 23003606 H1TF2 TRANSFAC yes 118248411
chr1 23003602 23003606 NFE TRANSFAC yes 118248412
chr1 23003602 23003606 SRF TRANSFAC yes 118248413
SNP sites on vista720[chr1:23003504-23003620]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 23003618 rs148421135 C A no 153408
Genes possibly regulated by vista720[chr1:23003504-23003620]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 22962999 22966101 + C1QA ENSG00000173372.12 22962999 0.96 1.0 301 59495
chr1 22970123 22974603 + C1QC ENSG00000159189.7 22970123 0.96 1.0 302 66619
chr1 22979255 22988031 + C1QB ENSG00000173369.11 22979255 0.96 0.0 303 75751
chr1 23037332 23241818 + EPHB2 ENSG00000133216.12 23037332 0.92 1.0 304 66288
Expression level of Genes
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miRNAs possibly regulated by vista720[chr1:23003504-23003620]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 23046059 23046080 + hsa-miR-4684-3p MIMAT0019770 23037331 1.4806698550424211e-05 0.0 0.0 20
Expression level of miRNAs
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